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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS28955 and RR42_RS28960 are separated by 192 nucleotides
RR42_RS28960 and RR42_RS28965 are separated by 55 nucleotides
RR42_RS28965 and RR42_RS28970 are separated by 61 nucleotides
RR42_RS28970 and RR42_RS28975 are separated by 15 nucleotides
RR42_RS28955: RR42_RS28955 - transcriptional regulator, at 1,855,225 to 1,855,506
_RS28955
RR42_RS28960: RR42_RS28960 - acyl-CoA hydrolase, at 1,855,699 to 1,856,184
_RS28960
RR42_RS28965: RR42_RS28965 - hypothetical protein, at 1,856,240 to 1,856,707
_RS28965
RR42_RS28970: RR42_RS28970 - 3-oxoacyl-ACP reductase, at 1,856,769 to 1,857,527
_RS28970
RR42_RS28975: RR42_RS28975 - acid phosphatase, at 1,857,543 to 1,858,343
_RS28975
Group
Condition
RR42
_RS28955
RR42
_RS28960
RR42
_RS28965
RR42
_RS28970
RR42
_RS28975
stress
R2A with Dimethyl Sulfoxide 5 vol%
-1.8
-0.3
+0.0
-0.1
-0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-1.3
-0.2
-0.4
+0.2
-0.5
carbon source
Carbon source Phenylacetic 2.5 mM
-0.4
-0.5
-0.4
-0.4
-0.1
stress
R2A with copper (II) chloride 0.25 mM
-0.6
-0.3
-0.4
-0.2
-0.3
carbon source
pyruvate (C)
-1.5
-0.0
-0.2
-0.0
-0.0
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-1.7
+0.2
+0.2
-0.4
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-1.1
+0.1
-0.2
-0.4
+0.0
stress
R2A with Vancomycin 0.5 mg/ml
-0.8
-0.3
+0.3
-0.1
-0.6
stress
R2A with sodium fluoride 100 mM
-0.7
-0.4
-0.3
+0.0
+0.1
carbon source
pyruvate (C)
-1.1
+0.0
-0.2
+0.2
-0.2
stress
R2A with Chloride 300 mM
-0.7
-0.2
-0.2
-0.2
+0.1
carbon source
succinate (C)
-0.6
-0.2
-0.1
-0.5
+0.3
carbon source
Ethanol (C)
-0.9
+0.2
-0.1
-0.2
+0.1
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-0.3
+0.2
-0.5
-0.4
+0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.3
+0.2
-0.4
-0.5
-0.4
carbon source
D,L-Lactate (C)
-0.9
+0.1
-0.2
+0.2
+0.1
carbon source
Heptanoic (C)
-0.6
-0.1
-0.3
+0.2
+0.1
carbon source
Disodium Glutarate (C)
-0.6
-0.1
-0.2
+0.2
+0.2
carbon source
L-Tryptophan (C)
-0.8
+0.2
-0.1
+0.3
-0.1
stress
R2A with Lomefloxacin 0.001 mM
-0.1
+0.5
+0.3
-0.7
-0.5
carbon source
Heptanoic (C)
-0.6
+0.1
-0.3
+0.6
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.6
-0.3
+0.2
-0.3
-0.2
carbon source
Protocatechuic Acid (C)
-0.4
-0.3
+0.6
+0.1
+0.0
nitrogen source
L-Isoleucine (N)
+0.5
-0.0
-0.3
+0.4
-0.2
carbon source
Valeric (C)
-0.1
+0.3
+0.3
+0.4
-0.3
stress
R2A with Chlorite 4 mM
+0.7
-0.2
+0.3
-0.3
+0.2
carbon source
Protocatechuic Acid (C)
+0.8
-0.2
-0.2
+0.3
+0.1
stress
R2A with Cobalt chloride 0.5 mM
+0.6
+0.5
+0.1
-0.5
+0.1
stress
R2A with Cobalt chloride 0.3 mM
+1.3
+0.0
-0.2
-0.2
+0.2
lb
LB
+0.6
+2.1
+0.6
+0.1
+0.0
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RR42_RS28965
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