Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS28615 and RR42_RS28620 are separated by 3 nucleotidesRR42_RS28620 and RR42_RS28625 overlap by 7 nucleotidesRR42_RS28625 and RR42_RS28630 overlap by 20 nucleotidesRR42_RS28630 and RR42_RS28635 are separated by 232 nucleotides RR42_RS28615: RR42_RS28615 - ABC transporter substrate-binding protein, at 1,776,353 to 1,777,297 _RS28615 RR42_RS28620: RR42_RS28620 - ABC transporter, at 1,777,301 to 1,778,131 _RS28620 RR42_RS28625: RR42_RS28625 - ABC transporter permease, at 1,778,125 to 1,779,159 _RS28625 RR42_RS28630: RR42_RS28630 - ABC transporter substrate-binding protein, at 1,779,140 to 1,780,180 _RS28630 RR42_RS28635: RR42_RS28635 - AraC family transcriptional regulator, at 1,780,413 to 1,781,411 _RS28635
Group Condition RR42_RS28615 RR42_RS28620 RR42_RS28625 RR42_RS28630 RR42_RS28635
lb LB -0.9 -0.4 -0.5 -1.4 -0.1
carbon source L-Asparagine (C) -0.0 -1.2 -0.1 -0.2 -0.4
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.4 -0.5 -0.2 -0.5 -0.3
carbon source pyruvate (C) -0.4 -0.5 +0.1 -0.9 -0.1
nitrogen source L-Serine (N) -0.7 -0.8 -0.0 -0.0 -0.2
nitrogen source Glycine (N) -1.2 -0.0 +0.1 -0.3 -0.2
nitrogen source L-Valine (N) -0.5 -0.8 +0.2 -0.5 +0.2
nitrogen source L-Tryptophan (N) -1.0 -0.6 -0.2 +0.4 +0.1
carbon source L-Histidine (C) +0.1 -1.0 -0.4 -0.0 +0.1
nitrogen source L-Citrulline (N) -0.4 -0.8 +0.1 -0.3 +0.1
nitrogen source casaminos (N) -1.0 -0.4 -0.0 +0.1 +0.2
stress R2A with Lomefloxacin 0.001 mM +0.3 -0.7 +0.7 -1.3 -0.2
carbon source adipate (C) +0.2 -0.7 +0.1 -0.6 -0.0
stress R2A with sodium fluoride 100 mM -0.5 +0.4 -0.0 -0.6 -0.0
nitrogen source L-Phenylalanine (N) -0.7 -0.5 +0.2 +0.0 +0.2
carbon source Protocatechuic Acid (C) +0.7 -1.2 -0.0 -0.0 +0.0
stress R2A with Paraquat dichloride 0.064 mg/ml +0.3 +0.1 +0.2 -0.8 -0.2
stress R2A with D-Cycloserine 0.01 mg/ml +0.3 -0.7 +0.3 -0.2 -0.2
stress R2A with Nickel (II) chloride 0.35 mM +1.0 -0.4 -0.9 -0.0 -0.1
nitrogen source L-Glutamine (N) -1.1 +0.4 +0.5 +0.0 -0.1
r2a R2A -0.6 +0.7 +0.2 -0.2 -0.0
carbon source Suberic (C) +0.5 +0.5 -0.3 -0.3 +0.1
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate +0.6 -0.6 +0.3 +0.1 +0.1
stress R2A with Cobalt chloride 0.3 mM +1.1 -0.4 +0.2 -0.1 -0.1
stress R2A with D-Cycloserine 0.5 mg/ml +0.3 -0.5 +0.2 +0.4 +0.3
carbon source L-Histidine (C) +0.3 -0.2 +0.4 +0.6 -0.2
carbon source Carbon source Phenylacetic 2.5 mM +0.4 +0.7 +0.3 -0.2 -0.1
stress R2A with Nickel (II) chloride 0.5 mM +1.5 -0.1 -0.1 -0.1 -0.2
stress R2A with Vancomycin 0.5 mg/ml +1.1 +0.3 -0.0 -0.1 +0.1
stress R2A with Vancomycin 0.5 mg/ml +0.7 +0.5 +0.4 +0.2 +0.1
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