Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS28545 and RR42_RS28550 are separated by 10 nucleotidesRR42_RS28550 and RR42_RS28555 overlap by 4 nucleotidesRR42_RS28555 and RR42_RS28560 are separated by 449 nucleotidesRR42_RS28560 and RR42_RS28565 are separated by 76 nucleotides RR42_RS28545: RR42_RS28545 - 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data), at 1,759,161 to 1,760,315 _RS28545 RR42_RS28550: RR42_RS28550 - enoyl-CoA hydratase, at 1,760,326 to 1,761,096 _RS28550 RR42_RS28555: RR42_RS28555 - 3-hydroxyisobutyrate dehydrogenase, at 1,761,093 to 1,761,992 _RS28555 RR42_RS28560: RR42_RS28560 - methylmalonate-semialdehyde dehydrogenase, at 1,762,442 to 1,763,962 _RS28560 RR42_RS28565: RR42_RS28565 - acyl-CoA dehydrogenase, at 1,764,039 to 1,765,172 _RS28565
Group Condition RR42_RS28545 RR42_RS28550 RR42_RS28555 RR42_RS28560 RR42_RS28565
nitrogen source L-Valine (N) -2.0 -0.8 N.D. -1.3 -0.9
nitrogen source L-Valine (N) -1.7 -0.8 N.D. -0.8 -0.7
lb LB -2.1 -1.1 N.D. +0.2 +0.3
carbon source L-Leucine (C) -0.0 -0.7 N.D. -0.2 -0.4
stress R2A with Paraquat dichloride 0.064 mg/ml -0.3 -0.7 N.D. -0.1 -0.1
r2a R2A +0.2 -1.1 N.D. -0.3 +0.1
carbon source pyruvate (C) -0.3 -0.8 N.D. -0.0 +0.1
stress R2A with D-Cycloserine 0.5 mg/ml +0.3 -0.2 N.D. -0.7 -0.2
carbon source L-Glutamine (C) -0.5 -0.3 N.D. -0.1 +0.2
stress R2A with nitrate 200 mM +0.2 -0.7 N.D. -0.2 -0.1
carbon source L-Lactate (C) +0.2 -0.9 N.D. -0.1 +0.3
stress R2A with Vancomycin 0.5 mg/ml +0.4 -0.7 N.D. -0.2 -0.1
stress R2A with copper (II) chloride 0.25 mM +0.5 -0.5 N.D. -0.1 -0.3
stress R2A with D-Cycloserine 0.01 mg/ml +0.3 -0.7 N.D. +0.2 +0.0
stress R2A with Nickel (II) chloride 0.5 mM +0.3 -0.7 N.D. +0.1 +0.1
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate -0.6 +0.3 N.D. -0.1 +0.3
carbon source Protocatechuic Acid (C) +0.5 -0.6 N.D. +0.4 -0.4
stress R2A with Nickel (II) chloride 0.35 mM +0.1 -0.8 N.D. +0.3 +0.2
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.8 +0.3 N.D. +0.4 +0.6
carbon source Carbon source Phenylacetic 2.5 mM +0.4 +0.8 N.D. -0.1 -0.3
carbon source propionate (C) +0.7 +0.2 N.D. -0.2 +0.1
carbon source adipate (C) +0.5 -0.2 N.D. +0.5 -0.0
temperature R2A 37C +0.7 +0.2 N.D. +0.2 -0.1
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.6 -0.6 N.D. +0.6 +0.5
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM +0.4 -0.6 N.D. +0.8 +0.4
carbon source Suberic (C) +0.4 +0.3 N.D. +0.4 -0.2
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL +0.5 +0.4 N.D. +0.5 +0.1
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.4 +0.3 N.D. +0.7 +0.3
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM +0.7 +0.2 N.D. +0.7 +0.3
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.7 +0.2 N.D. +0.8 +0.5
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