Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS28290 and RR42_RS28295 are separated by 88 nucleotidesRR42_RS28295 and RR42_RS28300 overlap by 4 nucleotidesRR42_RS28300 and RR42_RS28305 are separated by 474 nucleotidesRR42_RS28305 and RR42_RS28315 are separated by 1130 nucleotides RR42_RS28290: RR42_RS28290 - DNA-binding protein, at 1,707,565 to 1,708,161 _RS28290 RR42_RS28295: RR42_RS28295 - 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data), at 1,708,250 to 1,709,452 _RS28295 RR42_RS28300: RR42_RS28300 - L-threonine 3-dehydrogenase (EC 1.1.1.103) (from data), at 1,709,449 to 1,710,423 _RS28300 RR42_RS28305: RR42_RS28305 - L-threonine:H+ symporter (from data), at 1,710,898 to 1,712,316 _RS28305 RR42_RS28315: RR42_RS28315 - GntR family transcriptional regulator, at 1,713,447 to 1,714,115 _RS28315
Group Condition RR42_RS28290 RR42_RS28295 RR42_RS28300 RR42_RS28305 RR42_RS28315
lb LB -7.1 -0.5 -0.5 +0.5 -3.7
carbon source L-Threonine (C) +0.2 -2.3 -2.5 -1.6 -0.1
carbon source L-Asparagine (C) -4.9 +0.3 -0.0 +0.1 -0.8
carbon source L-Asparagine (C) -3.6 +0.0 -0.1 +0.2 -1.1
carbon source Protocatechuic Acid (C) -3.2 +0.0 -0.4 +0.1 -1.1
nitrogen source L-Threonine (N) -0.8 -1.7 -1.8 -0.5 +0.5
carbon source Protocatechuic Acid (C) -2.9 -0.2 -0.2 +0.2 -0.3
carbon source Disodium Glutarate (C) -3.0 -0.1 +0.2 +0.0 -0.5
carbon source Pimelic (C) -2.6 +0.1 -0.1 +0.1 -1.0
nitrogen source L-Asparagine (N) -2.9 +0.0 +0.0 +0.0 -0.1
carbon source Pimelic (C) -1.4 -0.2 +0.1 -0.0 -1.3
stress R2A with Cobalt chloride 0.3 mM -1.7 +0.1 -0.4 +0.1 -0.8
carbon source adipate (C) -1.4 +0.0 -0.1 +0.4 -1.4
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.6 -0.1 +0.2 -0.3 -1.5
carbon source Heptanoic (C) -0.6 +0.0 +0.3 -0.2 -1.8
carbon source L-Histidine (C) -1.1 +0.0 -0.5 +0.1 -0.7
carbon source Carbon source Phenylacetic 2.5 mM -0.4 -0.3 +0.0 +0.0 -1.5
carbon source Heptanoic (C) -0.1 +0.0 +0.2 -0.1 -2.1
stress R2A with D-Cycloserine 0.5 mg/ml -1.8 +0.2 -0.0 +0.5 -0.9
carbon source succinate (C) -1.1 +0.2 +0.3 +0.1 -1.1
carbon source 4-Hydroxybenzoic Acid (C) -1.1 +0.0 +0.4 +0.2 -1.2
stress R2A with Lomefloxacin 0.001 mM -1.6 -0.2 +0.3 +0.1 +0.5
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -1.3 +0.3 +0.2 +0.3 -0.2
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL +0.5 +0.4 +0.3 -0.3 -1.5
carbon source succinate (C) -1.0 +0.2 +0.2 +0.2 +0.7
carbon source propionate (C) +1.6 +0.2 +0.5 +0.1 -1.3
carbon source L-Proline (C) +2.3 +0.1 +0.3 +0.0 -0.2
carbon source propionate (C) +1.5 +0.3 +0.6 +0.3 -0.0
nitrogen source D-Alanine (N) +3.6 +0.4 +0.6 -0.4 -0.4
nitrogen source D-Alanine (N) +3.3 +0.6 +0.8 -0.1 -0.1
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