Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS27550 and RR42_RS27560 are separated by 1341 nucleotidesRR42_RS27560 and RR42_RS27565 are separated by 229 nucleotidesRR42_RS27565 and RR42_RS27570 overlap by 8 nucleotidesRR42_RS27570 and RR42_RS27575 are separated by 312 nucleotides RR42_RS27550: RR42_RS27550 - hypothetical protein, at 1,548,024 to 1,548,203 _RS27550 RR42_RS27560: RR42_RS27560 - transcriptional regulator, at 1,549,545 to 1,550,441 _RS27560 RR42_RS27565: RR42_RS27565 - Holin-like protein CidA, at 1,550,671 to 1,551,099 _RS27565 RR42_RS27570: RR42_RS27570 - murein hydrolase effector protein, at 1,551,092 to 1,551,784 _RS27570 RR42_RS27575: RR42_RS27575 - arabinose transporter permease, at 1,552,097 to 1,553,254 _RS27575
Group Condition RR42_RS27550 RR42_RS27560 RR42_RS27565 RR42_RS27570 RR42_RS27575
carbon source Azelaic (C) -3.8 -0.5 N.D. -1.4 +0.1
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -3.5 +0.1 N.D. -1.0 +0.1
nitrogen source L-Leucine (N) -3.9 -0.3 N.D. +0.3 +0.3
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -1.6 +0.0 N.D. -1.8 -0.2
carbon source Octanoic (C) -0.7 -0.0 N.D. -2.7 +0.2
carbon source Dodecandioic (C) -2.6 -0.1 N.D. -1.0 +0.4
carbon source L-Phenylalanine (C) -2.2 -0.4 N.D. -0.6 +0.1
carbon source Azelaic (C) -2.7 -0.4 N.D. -0.3 +0.3
stress R2A with Nickel (II) chloride 0.5 mM -3.0 +0.0 N.D. +0.3 +0.1
carbon source Valeric (C) -0.9 -0.3 N.D. -1.2 -0.1
carbon source propionate (C) -0.9 -0.1 N.D. -1.6 +0.2
stress R2A with Chlorite 4 mM -1.0 -0.3 N.D. -1.0 +0.1
nitrogen source L-Glutamine (N) -1.6 +0.1 N.D. -0.7 +0.3
carbon source Ethanol (C) -0.4 -0.2 N.D. -1.4 +0.1
stress R2A with Vancomycin 0.5 mg/ml -2.2 +0.3 N.D. -0.2 +0.1
carbon source succinate (C) -0.4 -0.2 N.D. -1.5 +0.1
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -2.4 +0.1 N.D. +0.3 +0.0
carbon source adipate (C) -0.7 -0.2 N.D. -1.1 +0.1
carbon source Suberic (C) -1.3 +0.0 N.D. -0.9 +0.4
stress R2A with Lomefloxacin 0.001 mM -0.8 +0.1 N.D. -0.8 -0.2
carbon source Dodecandioic (C) -0.6 -0.1 N.D. -1.0 +0.2
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate -0.2 +0.3 N.D. -1.7 +0.1
stress R2A with Cobalt chloride 0.5 mM +0.4 -0.3 N.D. -1.4 +0.1
carbon source Disodium Glutarate (C) +0.3 -0.1 N.D. -1.5 +0.3
r2a R2A -1.2 -0.2 N.D. +0.4 +0.2
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM +0.8 -0.3 N.D. -0.8 +0.2
temperature R2A 37C -1.0 +0.4 N.D. +0.2 +0.3
carbon source Protocatechuic Acid (C) +1.2 +0.4 N.D. +0.0 -0.5
carbon source Carbon source Phenylacetic 2.5 mM +1.5 -0.2 N.D. +0.1 +0.2
stress R2A with Paraquat dichloride 0.064 mg/ml +0.7 +0.1 N.D. +1.1 +0.0
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