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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS27270 and RR42_RS27275 are separated by 78 nucleotides
RR42_RS27275 and RR42_RS27280 are separated by 84 nucleotides
RR42_RS27280 and RR42_RS27285 are separated by 29 nucleotides
RR42_RS27285 and RR42_RS27290 are separated by 328 nucleotides
RR42_RS27270: RR42_RS27270 - NADP-dependent oxidoreductase, at 1,471,057 to 1,472,088
_RS27270
RR42_RS27275: RR42_RS27275 - alpha-dehydro-beta-deoxy-D-glucarate aldolase, at 1,472,167 to 1,472,934
_RS27275
RR42_RS27280: RR42_RS27280 - hypothetical protein, at 1,473,019 to 1,473,999
_RS27280
RR42_RS27285: RR42_RS27285 - hypothetical protein, at 1,474,029 to 1,476,470
_RS27285
RR42_RS27290: RR42_RS27290 - hypothetical protein, at 1,476,799 to 1,477,485
_RS27290
Group
Condition
RR42
_RS27270
RR42
_RS27275
RR42
_RS27280
RR42
_RS27285
RR42
_RS27290
stress
R2A with Nickel (II) chloride 0.35 mM
+0.3
+0.4
-0.7
-0.7
-1.6
carbon source
L-Histidine (C)
-0.1
-0.7
-0.1
-0.3
-0.9
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.0
+0.1
+0.1
-0.1
-2.4
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-0.2
-0.5
-0.8
-0.4
-0.2
stress
R2A with Dimethyl Sulfoxide 5 vol%
-0.2
-0.2
-0.9
-0.3
-0.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.0
-0.7
-0.1
-0.5
-0.5
stress
R2A with Paraquat dichloride 0.064 mg/ml
-0.2
-0.1
+0.6
+0.5
-2.6
nitrogen source
casaminos (N)
+0.2
-0.1
-0.3
-0.3
-1.1
carbon source
D,L-Lactate (C)
+0.1
-0.6
-0.9
+0.1
-0.1
nitrogen source
L-Valine (N)
+0.0
-0.6
-0.5
+0.4
-0.5
nitrogen source
L-Isoleucine (N)
+0.2
-0.2
-0.7
-0.7
+0.2
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
-0.1
+0.4
-0.8
+0.3
-0.7
carbon source
L-Histidine (C)
+0.3
+0.3
-0.5
-0.5
-0.4
stress
R2A with sodium fluoride 100 mM
-0.0
+0.5
-0.9
-0.1
-0.3
carbon source
Valeric (C)
-0.1
-0.1
-0.1
+0.6
-1.1
nitrogen source
L-Glutamine (N)
+0.4
+0.2
-0.3
-1.0
+0.1
carbon source
a-Ketoglutaric (C)
+0.0
-0.9
+0.4
+0.3
-0.1
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.0
-0.8
+0.6
+0.3
-0.1
carbon source
Azelaic (C)
-0.1
+0.2
+0.7
+0.0
-0.9
carbon source
Suberic (C)
+0.2
+0.3
+0.8
-0.2
-1.0
lb
LB
+0.4
-0.9
+1.3
-0.4
-0.3
nitrogen source
Glucuronamide (N)
+0.1
+0.2
-0.7
-0.0
+0.8
carbon source
Pimelic (C)
-0.2
-0.6
+0.5
+0.6
+0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.0
+1.1
-0.1
+0.3
-0.7
stress
R2A with Lomefloxacin 0.001 mM
-0.2
-0.4
-0.8
+0.2
+1.7
oxygen_nitrate
exometabolites; 5% oxygen; 5 mM nitrate
-0.2
+0.3
+0.5
-0.4
+0.3
stress
R2A with Vancomycin 0.5 mg/ml
+0.0
-0.9
+0.8
+0.3
+0.4
carbon source
Disodium Glutarate (C)
+0.0
+0.5
+0.2
+0.6
-0.4
nitrogen source
nitrate (N)
+0.3
+0.3
-0.1
-0.4
+0.8
stress
R2A with Cisplatin 0.001 mg/ml
+0.3
-0.4
-0.2
+0.5
+0.9
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RR42_RS27280
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RR42_RS27290
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