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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS27255 and RR42_RS27260 are separated by 424 nucleotides
RR42_RS27260 and RR42_RS27265 are separated by 99 nucleotides
RR42_RS27265 and RR42_RS27270 are separated by 101 nucleotides
RR42_RS27270 and RR42_RS27275 are separated by 78 nucleotides
RR42_RS27255: RR42_RS27255 - hypothetical protein, at 1,467,592 to 1,468,338
_RS27255
RR42_RS27260: RR42_RS27260 - hypothetical protein, at 1,468,763 to 1,469,890
_RS27260
RR42_RS27265: RR42_RS27265 - LacI family transcriptional regulator, at 1,469,990 to 1,470,955
_RS27265
RR42_RS27270: RR42_RS27270 - NADP-dependent oxidoreductase, at 1,471,057 to 1,472,088
_RS27270
RR42_RS27275: RR42_RS27275 - alpha-dehydro-beta-deoxy-D-glucarate aldolase, at 1,472,167 to 1,472,934
_RS27275
Group
Condition
RR42
_RS27255
RR42
_RS27260
RR42
_RS27265
RR42
_RS27270
RR42
_RS27275
nitrogen source
L-Valine (N)
-0.1
-0.3
-0.1
+0.0
-0.6
stress
R2A with Nickel (II) chloride 0.5 mM
+0.0
-0.4
+0.0
+0.1
-0.6
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.0
+0.3
-0.5
-0.2
-0.5
lb
LB
+0.2
-0.1
-0.4
+0.4
-0.9
carbon source
L-Histidine (C)
+0.1
-0.3
+0.2
-0.1
-0.7
stress
R2A with copper (II) chloride 0.25 mM
+0.2
-0.5
-0.3
+0.1
-0.2
nitrogen source
L-Isoleucine (N)
-0.2
-0.4
+0.2
-0.0
-0.3
carbon source
Pimelic (C)
-0.2
+0.1
+0.2
-0.2
-0.6
carbon source
Protocatechuic Acid (C)
-0.3
-0.3
-0.3
+0.2
-0.0
carbon source
a-Ketoglutaric (C)
+0.2
+0.1
-0.1
+0.0
-0.9
carbon source
Carbon source Phenylacetic 2.5 mM
-0.1
+0.2
-0.2
-0.1
-0.4
carbon source
L-Asparagine (C)
+0.3
-0.2
-0.2
-0.1
-0.3
carbon source
Carbon source D,L-Lactate 10 mM
-0.3
+0.4
-0.1
-0.2
-0.4
stress
R2A with D-Cycloserine 0.5 mg/ml
+0.2
+0.2
+0.0
-0.0
-0.8
stress
R2A with Vancomycin 0.5 mg/ml
+0.2
+0.4
-0.1
+0.0
-0.9
carbon source
L-Glutamine (C)
+0.3
+0.1
+0.1
-0.0
-0.6
stress
R2A with Lomefloxacin 0.00075 mM
+0.1
+0.4
-0.0
-0.3
-0.4
carbon source
Hexanoic (C)
-0.3
-0.1
+0.3
+0.2
-0.2
stress
R2A with Chlorite 4 mM
+0.3
-0.0
+0.2
-0.1
-0.4
stress
R2A with Chlorite 4 mM
+0.2
-0.3
-0.0
-0.3
+0.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.2
+0.3
+0.2
-0.0
-0.7
carbon source
L-Phenylalanine (C)
-0.0
-0.1
+0.3
+0.2
-0.3
stress
R2A with Cisplatin 0.001 mg/ml
+0.1
+0.3
-0.1
+0.3
-0.4
carbon source
L-Histidine (C)
-0.1
-0.3
+0.1
+0.3
+0.3
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
+0.0
+0.3
-0.3
-0.1
+0.4
stress
R2A with Vancomycin 0.5 mg/ml
+0.3
+0.3
+0.0
+0.2
-0.2
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
+0.1
+0.4
+0.2
-0.2
+0.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.2
-0.1
+0.1
+0.2
+0.6
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.2
+0.2
+0.2
-0.0
+1.1
stress
R2A with Cobalt chloride 0.5 mM
+0.3
+0.6
+0.3
+0.1
+0.2
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RR42_RS27265
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