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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS27085 and RR42_RS27090 are separated by 276 nucleotides
RR42_RS27090 and RR42_RS27095 are separated by 625 nucleotides
RR42_RS27095 and RR42_RS27100 are separated by 77 nucleotides
RR42_RS27100 and RR42_RS27105 are separated by 440 nucleotides
RR42_RS27085: RR42_RS27085 - hypothetical protein, at 1,428,996 to 1,429,961
_RS27085
RR42_RS27090: RR42_RS27090 - chemotaxis protein CheV, at 1,430,238 to 1,431,200
_RS27090
RR42_RS27095: RR42_RS27095 - hypothetical protein, at 1,431,826 to 1,432,677
_RS27095
RR42_RS27100: RR42_RS27100 - hypothetical protein, at 1,432,755 to 1,434,686
_RS27100
RR42_RS27105: RR42_RS27105 - hypothetical protein, at 1,435,127 to 1,435,360
_RS27105
Group
Condition
RR42
_RS27085
RR42
_RS27090
RR42
_RS27095
RR42
_RS27100
RR42
_RS27105
carbon source
adipate (C)
-0.0
-3.5
-0.2
-0.0
N.D.
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
+0.1
-1.5
-0.4
-0.3
N.D.
nitrogen source
L-Serine (N)
-0.5
-0.5
-0.7
+0.2
N.D.
nitrogen source
nitrate (N)
+0.1
-1.1
-0.6
+0.2
N.D.
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.2
-1.3
+0.0
+0.1
N.D.
nitrogen source
L-Glutamine (N)
+0.0
-1.1
-0.4
+0.2
N.D.
stress
R2A with Vancomycin 0.5 mg/ml
-0.3
-1.5
+1.0
-0.3
N.D.
carbon source
Suberic (C)
+0.0
-1.5
+0.5
-0.1
N.D.
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
+0.3
-1.4
+0.0
N.D.
nitrogen source
Glycine (N)
+0.1
+0.2
-1.3
+0.1
N.D.
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.3
-1.3
+0.2
-0.1
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
+0.2
-1.6
+0.2
+0.4
N.D.
stress
R2A with Zinc 0.1 mM
-0.1
-1.3
+0.8
-0.1
N.D.
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
-0.6
+0.7
-0.4
N.D.
stress
R2A with Nickel (II) chloride 0.35 mM
-0.3
+0.7
-0.3
-0.5
N.D.
carbon source
Ethanol (C)
+0.2
-1.3
+0.7
+0.0
N.D.
stress
R2A with Dimethyl Sulfoxide 5 vol%
+0.1
-0.9
+0.7
-0.2
N.D.
carbon source
Protocatechuic Acid (C)
-0.0
-1.0
+0.5
+0.3
N.D.
stress
R2A with nitrate 150 mM
+0.7
-0.5
-0.2
-0.2
N.D.
nitrogen source
L-Tryptophan (N)
-0.5
-0.4
+0.7
+0.0
N.D.
carbon source
succinate (C)
-0.2
-0.7
+0.8
+0.1
N.D.
r2a
R2A
+0.5
-0.8
+0.9
-0.5
N.D.
stress
R2A with Lomefloxacin 0.001 mM
+0.2
-1.8
+1.7
+0.5
N.D.
stress
R2A with Lomefloxacin 0.00075 mM
-0.2
+0.5
+0.9
-0.1
N.D.
carbon source
Dodecandioic (C)
+0.2
+1.0
+0.2
-0.2
N.D.
nitrogen source
L-Threonine (N)
+0.3
-0.2
+1.0
+0.1
N.D.
lb
LB
+0.0
+2.0
-0.4
-0.2
N.D.
carbon source
pyruvate (C)
-0.0
+0.7
+0.9
-0.1
N.D.
stress
R2A with sodium fluoride 100 mM
+0.2
+0.7
+0.4
+0.3
N.D.
stress
R2A with Vancomycin 0.5 mg/ml
-0.1
+0.7
+1.1
+0.1
N.D.
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