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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS26840 and RR42_RS26845 are separated by 333 nucleotides
RR42_RS26845 and RR42_RS26850 are separated by 29 nucleotides
RR42_RS26850 and RR42_RS26855 are separated by 77 nucleotides
RR42_RS26855 and RR42_RS26860 are separated by 247 nucleotides
RR42_RS26840: RR42_RS26840 - DNA-binding protein, at 1,373,051 to 1,373,944
_RS26840
RR42_RS26845: RR42_RS26845 - D-aminoacylase, at 1,374,278 to 1,375,744
_RS26845
RR42_RS26850: RR42_RS26850 - hypothetical protein, at 1,375,774 to 1,377,117
_RS26850
RR42_RS26855: RR42_RS26855 - glucan biosynthesis protein G, at 1,377,195 to 1,378,736
_RS26855
RR42_RS26860: RR42_RS26860 - beta-D-glucoside glucohydrolase, at 1,378,984 to 1,381,272
_RS26860
Group
Condition
RR42
_RS26840
RR42
_RS26845
RR42
_RS26850
RR42
_RS26855
RR42
_RS26860
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-1.1
-0.2
+0.0
-0.2
-0.0
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-1.1
-0.3
-0.0
+0.0
+0.2
carbon source
Protocatechuic Acid (C)
-1.0
+0.3
+0.1
-0.4
-0.0
carbon source
Protocatechuic Acid (C)
-1.0
+0.0
+0.2
-0.4
+0.0
carbon source
a-Ketoglutaric (C)
-0.5
-0.3
-0.1
-0.1
+0.1
stress
R2A with Nickel (II) chloride 0.5 mM
+0.0
+0.0
+0.1
-1.0
-0.1
carbon source
Pimelic (C)
-1.0
-0.2
-0.1
+0.3
+0.1
nitrogen source
L-Glutamine (N)
-0.5
+0.1
+0.0
-0.2
-0.3
nitrogen source
Glucuronamide (N)
-0.5
-0.2
+0.1
-0.2
+0.0
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.8
-0.2
+0.1
+0.1
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-1.2
+0.1
+0.2
+0.2
-0.2
nitrogen source
nitrite (N)
-0.7
-0.2
+0.1
-0.1
+0.1
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.5
-0.2
-0.0
-0.2
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-1.0
+0.0
+0.3
+0.1
+0.0
stress
R2A with Nickel (II) chloride 0.35 mM
+0.2
+0.1
-0.1
-0.6
-0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.8
+0.1
-0.1
+0.1
+0.2
stress
R2A with Lomefloxacin 0.001 mM
-0.5
+0.1
-0.2
-0.2
+0.1
carbon source
Pimelic (C)
-0.8
+0.0
+0.0
+0.2
+0.1
lb
LB
+0.1
-0.4
-0.1
-0.4
+0.3
nitrogen source
L-Tryptophan (N)
-0.5
-0.1
+0.2
+0.0
+0.1
temperature
R2A 37C
+0.4
-0.2
+0.2
-0.1
+0.2
stress
R2A with Zinc 0.1 mM
-0.2
+0.4
+0.0
+0.4
-0.2
stress
R2A with Dimethyl Sulfoxide 5 vol%
+0.5
+0.1
+0.3
+0.1
-0.1
stress
R2A with A22 0.01 mg/ml
+0.3
+0.3
-0.1
+0.2
+0.2
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.3
+0.3
+0.1
+0.3
+0.1
stress
R2A with Cobalt chloride 0.5 mM
-0.0
+0.5
+0.1
+0.3
+0.3
carbon source
Disodium Glutarate (C)
+1.4
+0.1
+0.0
+0.0
-0.1
carbon source
Disodium Glutarate (C)
+1.5
-0.1
-0.1
+0.1
+0.2
carbon source
adipate (C)
+4.1
-0.3
-0.0
+0.4
-0.0
carbon source
adipate (C)
+4.1
-0.1
+0.1
+0.3
-0.0
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