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Gene
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Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS26260 and RR42_RS26265 are separated by 485 nucleotides
RR42_RS26265 and RR42_RS26270 are separated by 727 nucleotides
RR42_RS26270 and RR42_RS26275 are separated by 254 nucleotides
RR42_RS26275 and RR42_RS26280 are separated by 58 nucleotides
RR42_RS26260: RR42_RS26260 - hypothetical protein, at 1,250,573 to 1,251,274
_RS26260
RR42_RS26265: RR42_RS26265 - hypothetical protein, at 1,251,760 to 1,251,990
_RS26265
RR42_RS26270: RR42_RS26270 - hydroperoxidase, at 1,252,718 to 1,254,955
_RS26270
RR42_RS26275: RR42_RS26275 - CopG family transcriptional regulator, at 1,255,210 to 1,255,641
_RS26275
RR42_RS26280: RR42_RS26280 - poly(3-hydroxyalkanoate) depolymerase, at 1,255,700 to 1,256,770
_RS26280
Group
Condition
RR42
_RS26260
RR42
_RS26265
RR42
_RS26270
RR42
_RS26275
RR42
_RS26280
stress
R2A with Lomefloxacin 0.001 mM
-0.3
-1.8
-0.2
-1.9
-0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.0
-2.3
+0.1
-0.1
-0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.1
-0.1
+0.1
-1.6
-0.3
carbon source
L-Alanine (C)
-0.1
-1.4
+0.0
-0.2
-0.0
stress
R2A with D-Cycloserine 0.01 mg/ml
-0.2
-1.6
+0.1
-0.1
+0.1
carbon source
succinate (C)
+0.1
-0.6
+0.0
-0.5
-0.5
nitrogen source
L-Lysine (N)
-0.0
-1.2
+0.1
-0.2
-0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.0
-1.5
-0.1
+0.2
-0.1
carbon source
propionate (C)
-0.2
-1.5
+0.1
+0.2
+0.1
stress
R2A with copper (II) chloride 0.25 mM
+0.0
-0.2
+0.4
-1.4
-0.2
carbon source
Protocatechuic Acid (C)
-0.0
+0.4
+0.0
-1.3
-0.3
carbon source
adipate (C)
+0.3
-2.0
+0.1
+0.1
+0.3
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
+0.2
-0.8
+0.3
-0.6
-0.1
r2a
R2A
-0.2
-1.2
+0.1
+0.4
-0.1
carbon source
L-Phenylalanine (C)
-0.1
+0.6
-0.1
-0.8
-0.2
carbon source
D-Gluconic Acid (C)
-0.1
+0.6
-0.0
-0.6
-0.5
nitrogen source
L-Citrulline (N)
-0.3
-0.8
+0.1
+0.4
+0.2
stress
R2A with Chloride 300 mM
+0.2
-0.7
-0.0
+0.6
-0.4
oxygen_nitrate
exometabolites; 5% oxygen; 5 mM nitrate
+0.3
-1.2
+0.1
+0.4
+0.1
stress
R2A with Nickel (II) chloride 0.35 mM
+0.2
-1.3
+0.1
+0.4
+0.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.6
-0.1
+0.1
-0.7
+0.1
nitrogen source
L-Leucine (N)
+0.0
+0.8
+0.1
-0.7
-0.1
carbon source
L-Leucine (C)
+0.1
+0.9
-0.2
-0.2
-0.3
nitrogen source
L-Phenylalanine (N)
+0.0
+0.9
+0.2
-0.4
-0.2
carbon source
Protocatechuic Acid (C)
+0.2
+1.1
-0.3
-0.5
+0.2
carbon source
Hexanoic (C)
+0.1
+1.1
+0.0
-0.4
-0.2
stress
R2A with Cisplatin 0.001 mg/ml
-0.4
+0.5
-0.1
+0.4
+0.5
nitrogen source
L-Isoleucine (N)
-0.2
+0.9
+0.2
+0.4
-0.2
carbon source
Valeric (C)
-0.0
+1.6
+0.0
-0.2
+0.2
nitrogen source
L-Glutamine (N)
+0.4
+1.5
+0.1
+0.6
-0.0
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RR42_RS26270
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