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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS26070 and RR42_RS26075 are separated by 89 nucleotides
RR42_RS26075 and RR42_RS26080 are separated by 85 nucleotides
RR42_RS26080 and RR42_RS26085 are separated by 66 nucleotides
RR42_RS26085 and RR42_RS26090 are separated by 54 nucleotides
RR42_RS26070: RR42_RS26070 - cytochrome BD ubiquinol oxidase subunit II, at 1,198,223 to 1,199,227
_RS26070
RR42_RS26075: RR42_RS26075 - cytochrome D ubiquinol oxidase subunit I, at 1,199,317 to 1,200,627
_RS26075
RR42_RS26080: RR42_RS26080 - hypothetical protein, at 1,200,713 to 1,201,372
_RS26080
RR42_RS26085: RR42_RS26085 - acetoacetyl-CoA reductase, at 1,201,439 to 1,202,185
_RS26085
RR42_RS26090: RR42_RS26090 - acetyl-CoA acetyltransferase, at 1,202,240 to 1,203,415
_RS26090
Group
Condition
RR42
_RS26070
RR42
_RS26075
RR42
_RS26080
RR42
_RS26085
RR42
_RS26090
carbon source
adipate (C)
-0.0
-0.1
-4.0
+0.2
-0.1
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.2
+0.2
-3.3
+0.0
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.4
+0.1
-3.4
+0.2
+0.5
carbon source
Pimelic (C)
+0.1
-0.2
-0.3
-1.1
-0.4
nitrogen source
L-Serine (N)
-0.2
-0.1
-0.7
-0.6
-0.3
stress
R2A with Nickel (II) chloride 0.35 mM
+0.1
+0.2
-1.6
-0.9
+0.2
carbon source
Protocatechuic Acid (C)
-0.0
-0.1
-0.5
-0.9
-0.4
stress
R2A with Cisplatin 0.001 mg/ml
+0.2
-0.1
-1.2
-0.4
-0.1
stress
R2A with Zinc 0.1 mM
-0.8
-0.3
+0.3
-0.2
-0.5
carbon source
Suberic (C)
-0.0
+0.2
-1.5
-0.2
+0.1
carbon source
Azelaic (C)
+0.4
-0.1
-0.7
-0.2
-0.5
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
-0.0
+0.0
-1.6
+0.5
-0.1
stress
R2A with Vancomycin 0.5 mg/ml
-0.3
+0.4
+0.5
-0.8
-0.6
carbon source
L-Histidine (C)
+0.3
+0.3
-1.5
+0.1
+0.2
carbon source
Valeric (C)
+0.2
-0.4
+0.8
-0.7
-0.0
stress
R2A with Lomefloxacin 0.00075 mM
-0.2
+0.4
+0.7
-0.5
-0.2
stress
R2A with Cisplatin 0.001 mg/ml
+0.4
+0.2
-0.7
+0.5
+0.5
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.0
+0.6
-0.6
+0.7
+0.1
carbon source
L-Malic (C)
+0.3
+0.3
-0.5
+0.6
+0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.3
+0.1
+1.1
-0.2
+0.5
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.7
+0.4
+0.2
+1.1
+0.3
carbon source
L-Glutamine (C)
+0.0
-0.2
+1.1
+0.3
+0.4
stress
R2A with Lomefloxacin 0.001 mM
-0.4
+2.1
-0.7
+0.4
+0.2
nitrogen source
L-Valine (N)
+0.2
-0.2
+1.5
+0.5
+0.0
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.2
+0.3
+1.1
-0.0
+0.5
carbon source
L-Histidine (C)
-0.2
-0.1
+1.2
+1.0
+0.1
carbon source
L-Tryptophan (C)
+0.3
-0.1
+1.0
+1.0
-0.1
nitrogen source
L-Tryptophan (N)
+0.1
+0.2
+1.2
+0.8
+0.2
carbon source
L-Malic (C)
+0.2
+0.2
+0.9
+0.9
+0.3
carbon source
a-Ketoglutaric (C)
+0.4
-0.1
+1.3
+0.6
+0.4
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