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Gene
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Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS25805 and RR42_RS25810 are separated by 623 nucleotides
RR42_RS25810 and RR42_RS25815 are separated by 1 nucleotides
RR42_RS25815 and RR42_RS25820 are separated by 47 nucleotides
RR42_RS25820 and RR42_RS25825 are separated by 55 nucleotides
RR42_RS25805: RR42_RS25805 - hypothetical protein, at 1,129,045 to 1,130,439
_RS25805
RR42_RS25810: RR42_RS25810 - DNA-binding protein, at 1,131,063 to 1,131,314
_RS25810
RR42_RS25815: RR42_RS25815 - hypothetical protein, at 1,131,316 to 1,132,113
_RS25815
RR42_RS25820: RR42_RS25820 - DNA polymerase III subunit epsilon, at 1,132,161 to 1,132,781
_RS25820
RR42_RS25825: RR42_RS25825 - histidine kinase, at 1,132,837 to 1,133,787
_RS25825
Group
Condition
RR42
_RS25805
RR42
_RS25810
RR42
_RS25815
RR42
_RS25820
RR42
_RS25825
carbon source
L-Histidine (C)
+0.1
-0.4
-0.8
-0.1
-0.1
lb
LB
+0.1
-0.5
-0.3
-0.0
-0.7
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.1
+0.2
-0.1
-0.5
-0.6
stress
R2A with Cisplatin 0.001 mg/ml
+0.0
-0.5
-0.2
-0.4
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
+0.0
-0.5
+0.2
-0.5
-0.4
stress
R2A with Lomefloxacin 0.001 mM
-0.1
-0.4
+0.3
-0.4
-0.5
carbon source
L-Asparagine (C)
-0.1
+0.2
-0.2
-0.7
-0.1
stress
R2A with nitrate 200 mM
-0.1
-0.2
-0.4
+0.2
-0.4
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.1
+0.1
-1.1
-0.1
+0.2
nitrogen source
D-Alanine (N)
+0.2
-0.5
-0.2
-0.1
-0.4
carbon source
Protocatechuic Acid (C)
-0.0
+0.2
+0.3
-0.7
-0.5
carbon source
Ethanol (C)
-0.1
+0.3
-0.5
-0.2
-0.2
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
-0.1
-0.3
-0.5
+0.4
+0.0
r2a
R2A
-0.0
-0.1
+0.4
-0.4
-0.4
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.1
+0.0
-0.6
-0.1
+0.5
stress
R2A with Bacitracin 0.5 mg/ml
+0.1
-0.3
-0.1
+0.4
-0.4
nitrogen source
L-Tryptophan (N)
+0.0
+0.1
-0.6
+0.4
-0.3
carbon source
L-Proline (C)
-0.0
+0.1
+0.5
-0.7
-0.0
nitrogen source
nitrite (N)
+0.0
-0.2
-0.5
+0.6
-0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.1
-0.1
+0.0
+0.8
-0.8
carbon source
Dodecandioic (C)
+0.0
+0.3
-0.5
-0.1
+0.3
carbon source
Disodium Glutarate (C)
-0.3
+0.7
-0.4
+0.2
-0.1
carbon source
Protocatechuic Acid (C)
+0.0
+0.8
-0.3
-0.0
-0.4
carbon source
Azelaic (C)
-0.2
+0.4
-0.1
+0.3
-0.2
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.1
+0.3
-0.4
+0.8
-0.0
stress
R2A with A22 0.01 mg/ml
+0.0
-0.3
+0.3
+0.5
+0.3
carbon source
Dodecandioic (C)
+0.0
+0.6
-0.5
+0.3
+0.4
carbon source
Heptanoic (C)
-0.2
+0.7
-0.1
+0.5
+0.1
stress
R2A with Cobalt chloride 0.5 mM
-0.2
+0.1
+0.7
+0.5
+0.0
carbon source
Valeric (C)
+0.1
+0.6
+0.5
-0.2
+0.1
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