Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 143 experiments or choose conditions or try the comparative fitness browser

500 ntRR42_RS25305 and RR42_RS25310 are separated by 544 nucleotidesRR42_RS25310 and RR42_RS25315 are separated by 153 nucleotidesRR42_RS25315 and RR42_RS25320 are separated by 75 nucleotidesRR42_RS25320 and RR42_RS25325 are separated by 42 nucleotides RR42_RS25305: RR42_RS25305 - transposase, at 1,016,664 to 1,016,822 _RS25305 RR42_RS25310: RR42_RS25310 - LysR family transcriptional regulator, at 1,017,367 to 1,018,290 _RS25310 RR42_RS25315: RR42_RS25315 - methylmalonate-semialdehyde dehydrogenase, at 1,018,444 to 1,019,949 _RS25315 RR42_RS25320: RR42_RS25320 - alcohol dehydrogenase, at 1,020,025 to 1,021,008 _RS25320 RR42_RS25325: RR42_RS25325 - 3-hydroxyisobutyrate dehydrogenase, at 1,021,051 to 1,021,932 _RS25325
Group Condition RR42_RS25305 RR42_RS25310 RR42_RS25315 RR42_RS25320 RR42_RS25325
carbon source L-Leucine (C) -0.3 -0.1 -0.1 -0.5 -0.1
stress R2A with Polymyxin B sulfate 0.005 mg/ml -0.4 -0.2 +0.0 -0.4 -0.0
carbon source 4-Hydroxybenzoic Acid (C) -0.6 -0.0 -0.1 -0.2 -0.1
carbon source Protocatechuic Acid (C) -0.1 -0.0 +0.1 -0.3 -0.5
lb LB -1.0 +0.5 +0.1 +0.1 -0.4
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate -0.7 +0.1 +0.1 +0.0 -0.1
stress R2A with Chloride 300 mM -0.6 -0.0 +0.1 -0.1 +0.1
carbon source D-Gluconic Acid (C) +0.2 -0.2 -0.1 -0.1 -0.4
carbon source 4-Hydroxybenzoic Acid (C) +0.3 -0.2 -0.1 -0.3 -0.2
carbon source Suberic (C) -0.3 +0.0 +0.2 +0.1 -0.4
stress R2A with Lomefloxacin 0.00075 mM +0.3 -0.2 -0.2 -0.2 +0.1
carbon source pyruvate (C) +0.5 -0.1 -0.3 -0.2 -0.2
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.5 -0.1 -0.0 +0.2 +0.2
stress R2A with copper (II) chloride 0.25 mM +0.4 -0.1 -0.4 +0.2 -0.2
stress R2A with Zinc 0.1 mM +0.5 -0.1 -0.2 -0.3 +0.1
carbon source adipate (C) +0.2 +0.1 +0.1 -0.4 +0.2
carbon source Trisodium citrate (C) +0.6 +0.0 -0.1 -0.2 -0.0
nitrogen source Glucuronamide (N) +0.6 -0.3 +0.0 -0.0 -0.0
stress R2A with Doxycycline hyclate 0.0001 mg/ml +0.6 -0.1 -0.2 -0.1 +0.1
carbon source D,L-Lactate (C) +0.6 -0.1 -0.2 -0.2 +0.1
r2a R2A +0.4 -0.2 -0.2 +0.1 +0.1
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.4 +0.2 +0.2 +0.3 +0.2
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.7 +0.0 +0.3 +0.6 +0.3
carbon source Octanoic (C) +0.1 -0.2 +0.3 -0.2 +0.5
stress R2A with Vancomycin 0.5 mg/ml +0.8 -0.2 -0.4 +0.3 +0.1
stress R2A with Nickel (II) chloride 0.35 mM +0.1 +0.3 -0.1 +0.3 +0.1
nitrogen source L-Glutamine (N) +0.3 +0.2 +0.1 +0.1 +0.3
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate +0.3 +0.3 -0.1 +0.6 -0.1
nitrogen source D-Alanine (N) +0.3 +0.2 +0.2 +0.0 +0.3
stress R2A with Cisplatin 0.001 mg/ml +1.0 -0.1 -0.2 +0.0 +0.6
remove
RR42_RS25305
plot
remove
RR42_RS25310
plot
remove
RR42_RS25315
remove
RR42_RS25320
plot
remove
RR42_RS25325
plot