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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS25245 and RR42_RS25250 are separated by 27 nucleotides
RR42_RS25250 and RR42_RS25255 are separated by 106 nucleotides
RR42_RS25255 and RR42_RS25265 are separated by 965 nucleotides
RR42_RS25265 and RR42_RS25270 are separated by 179 nucleotides
RR42_RS25245: RR42_RS25245 - Asp/Glu/hydantoin racemase, at 1,004,553 to 1,005,209
_RS25245
RR42_RS25250: RR42_RS25250 - ABC transporter substrate-binding protein, at 1,005,237 to 1,006,223
_RS25250
RR42_RS25255: RR42_RS25255 - 1,4-butanediol diacrylate esterase, at 1,006,330 to 1,007,493
_RS25255
RR42_RS25265: RR42_RS25265 - hypothetical protein, at 1,008,459 to 1,008,830
_RS25265
RR42_RS25270: RR42_RS25270 - MFS transporter, at 1,009,010 to 1,010,350
_RS25270
Group
Condition
RR42
_RS25245
RR42
_RS25250
RR42
_RS25255
RR42
_RS25265
RR42
_RS25270
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.3
-0.3
+0.1
N.D.
-0.4
nitrogen source
L-Leucine (N)
+0.1
-0.4
-0.2
N.D.
-0.3
stress
R2A with Cisplatin 0.001 mg/ml
-0.2
-0.4
-0.0
N.D.
-0.2
stress
R2A with nitrate 200 mM
-0.3
-0.3
-0.3
N.D.
+0.1
nitrogen source
L-Glutamine (N)
-0.7
-0.2
+0.1
N.D.
-0.0
carbon source
L-Leucine (C)
+0.1
-0.4
-0.2
N.D.
-0.2
carbon source
a-Ketoglutaric (C)
-0.6
+0.1
+0.1
N.D.
-0.3
carbon source
Protocatechuic Acid (C)
+0.3
-0.5
+0.0
N.D.
-0.4
nitrogen source
L-Valine (N)
-0.5
-0.3
+0.2
N.D.
+0.0
carbon source
L-Glutamine (C)
-0.6
+0.2
-0.3
N.D.
+0.2
stress
R2A with Sisomicin 0.035 mg/ml
-0.4
+0.3
-0.2
N.D.
-0.1
carbon source
4-Hydroxybenzoic Acid (C)
+0.3
-0.2
-0.3
N.D.
-0.1
carbon source
Heptanoic (C)
+0.1
+0.3
-0.3
N.D.
-0.4
carbon source
Carbon source Phenylacetic 2.5 mM
-0.3
+0.4
-0.3
N.D.
-0.1
carbon source
Dodecandioic (C)
+0.3
-0.1
-0.2
N.D.
-0.3
nitrogen source
L-Phenylalanine (N)
-0.6
+0.0
+0.1
N.D.
+0.3
carbon source
propionate (C)
+0.2
-0.5
+0.1
N.D.
+0.1
carbon source
pyruvate (C)
-0.4
+0.3
-0.1
N.D.
+0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.9
+0.8
+0.2
N.D.
+0.1
nitrogen source
D-Alanine (N)
+0.5
-0.3
+0.0
N.D.
-0.1
nitrogen source
casaminos (N)
-0.3
+0.3
+0.2
N.D.
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.0
-0.2
+0.6
N.D.
+0.1
stress
R2A with Zinc 0.1 mM
-0.0
+0.2
+0.1
N.D.
+0.5
carbon source
Valeric (C)
+0.1
+0.3
+0.1
N.D.
+0.3
stress
R2A with Cisplatin 0.001 mg/ml
+0.2
+0.2
+0.4
N.D.
+0.0
carbon source
Suberic (C)
+0.4
+0.2
+0.0
N.D.
+0.3
stress
R2A with Nickel (II) chloride 0.5 mM
+0.1
+0.4
+0.2
N.D.
+0.2
stress
R2A with Bacitracin 0.5 mg/ml
+0.0
+0.4
+0.2
N.D.
+0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.6
+0.8
-0.0
N.D.
-0.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.5
+0.8
+0.6
N.D.
+0.1
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