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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS24760 and RR42_RS24770 are separated by 1408 nucleotides
RR42_RS24770 and RR42_RS24775 are separated by 142 nucleotides
RR42_RS24775 and RR42_RS24780 are separated by 160 nucleotides
RR42_RS24780 and RR42_RS24785 are separated by 74 nucleotides
RR42_RS24760: RR42_RS24760 - hypothetical protein, at 893,685 to 893,993
_RS24760
RR42_RS24770: RR42_RS24770 - NADH:flavin oxidoreductase, at 895,402 to 896,562
_RS24770
RR42_RS24775: RR42_RS24775 - transcriptional regulator, at 896,705 to 897,655
_RS24775
RR42_RS24780: RR42_RS24780 - alpha/beta hydrolase, at 897,816 to 898,736
_RS24780
RR42_RS24785: RR42_RS24785 - NAD-dependent dehydratase, at 898,811 to 899,458
_RS24785
Group
Condition
RR42
_RS24760
RR42
_RS24770
RR42
_RS24775
RR42
_RS24780
RR42
_RS24785
carbon source
Protocatechuic Acid (C)
-3.4
+0.1
+0.0
+0.1
-0.2
stress
R2A with Dimethyl Sulfoxide 5 vol%
-1.5
-0.3
-0.2
+0.0
-0.7
lb
LB
-1.1
+0.4
-0.3
-0.7
-0.5
stress
R2A with Vancomycin 0.5 mg/ml
-1.6
+0.3
-0.2
-0.4
-0.2
stress
R2A with nitrate 200 mM
-2.1
+0.2
+0.1
-0.1
+0.1
carbon source
Protocatechuic Acid (C)
-2.1
-0.0
-0.2
+0.2
+0.1
stress
R2A with Vancomycin 0.5 mg/ml
-0.5
-0.4
-0.3
-0.1
-0.3
stress
R2A with Chlorite 4 mM
-1.1
-0.3
-0.1
+0.3
-0.2
carbon source
Carbon source Phenylacetic 2.5 mM
-0.9
-0.5
+0.1
+0.1
-0.2
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-0.3
+0.3
-0.3
-0.5
-0.5
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-1.3
+0.1
-0.1
-0.1
+0.4
stress
R2A with sodium fluoride 100 mM
-1.3
+0.1
+0.2
-0.1
+0.1
stress
R2A with Nickel (II) chloride 0.25 mM
-0.9
+0.3
-0.2
+0.3
-0.1
stress
R2A with Cobalt chloride 0.5 mM
+0.7
-0.4
-0.1
+0.1
-0.7
carbon source
L-Phenylalanine (C)
-0.9
+0.1
+0.2
-0.2
+0.3
nitrogen source
casaminos (N)
+0.9
-0.2
-0.1
-0.1
-0.5
nitrogen source
D-Alanine (N)
+1.1
-0.3
-0.1
-0.0
-0.5
nitrogen source
L-Valine (N)
-1.2
+0.3
+0.2
+0.2
+0.8
carbon source
L-Alanine (C)
-0.3
+0.3
+0.1
-0.6
+0.8
stress
R2A with Lomefloxacin 0.001 mM
+1.1
-0.2
-0.0
-0.5
+0.0
nitrogen source
Glucuronamide (N)
+1.0
+0.2
+0.0
-0.3
-0.5
stress
R2A with Bacitracin 0.5 mg/ml
+0.6
+0.1
+0.1
+0.3
-0.6
nitrogen source
L-Phenylalanine (N)
+1.1
+0.2
-0.2
-0.1
-0.1
nitrogen source
L-Leucine (N)
+1.4
+0.1
+0.2
-0.0
-0.5
nitrogen source
L-Lysine (N)
+0.5
-0.3
+0.2
-0.2
+0.9
carbon source
D-Lactate (C)
+0.5
+0.4
+0.1
-0.4
+0.6
carbon source
D-Fructose (C)
+1.0
+0.1
+0.1
-0.4
+0.6
carbon source
L-Leucine (C)
+0.7
+0.3
-0.1
-0.1
+0.7
nitrogen source
L-Tryptophan (N)
+1.5
+0.1
+0.0
+0.1
-0.1
stress
R2A with Cobalt chloride 0.3 mM
+0.9
+0.5
+0.1
-0.1
+0.5
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RR42_RS24775
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