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Gene
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Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS24620 and RR42_RS24625 are separated by 38 nucleotides
RR42_RS24625 and RR42_RS24630 are separated by 35 nucleotides
RR42_RS24630 and RR42_RS24635 are separated by 44 nucleotides
RR42_RS24635 and RR42_RS24640 are separated by 34 nucleotides
RR42_RS24620: RR42_RS24620 - amine oxidase, at 860,256 to 861,752
_RS24620
RR42_RS24625: RR42_RS24625 - hypothetical protein, at 861,791 to 862,432
_RS24625
RR42_RS24630: RR42_RS24630 - amine oxidase, at 862,468 to 863,964
_RS24630
RR42_RS24635: RR42_RS24635 - hypothetical protein, at 864,009 to 864,650
_RS24635
RR42_RS24640: RR42_RS24640 - amine oxidase, at 864,685 to 866,181
_RS24640
Group
Condition
RR42
_RS24620
RR42
_RS24625
RR42
_RS24630
RR42
_RS24635
RR42
_RS24640
carbon source
Disodium Glutarate (C)
-0.3
-0.3
-0.2
-0.2
-0.3
carbon source
succinate (C)
-0.3
-0.5
-0.3
+0.1
-0.2
carbon source
propionate (C)
-0.4
-0.2
-0.1
-0.3
+0.0
stress
R2A with Dimethyl Sulfoxide 5 vol%
+0.0
-0.0
-0.0
-0.5
-0.4
carbon source
Suberic (C)
-0.1
-0.4
-0.1
-0.3
+0.1
carbon source
Pimelic (C)
-0.2
-0.3
-0.2
+0.1
-0.2
carbon source
Azelaic (C)
-0.0
-0.6
+0.2
-0.1
-0.2
carbon source
Protocatechuic Acid (C)
-0.1
-0.6
-0.2
+0.3
-0.1
carbon source
Octanoic (C)
-0.4
-0.1
+0.1
-0.4
+0.1
stress
R2A with Cobalt chloride 0.5 mM
-0.1
+0.2
-0.0
-0.6
-0.0
carbon source
Carbon source D,L-Lactate 10 mM
+0.0
-0.3
-0.2
+0.2
-0.3
carbon source
Heptanoic (C)
-0.2
-0.4
+0.0
-0.1
+0.3
carbon source
a-Ketoglutaric (C)
+0.1
-0.2
+0.1
-0.6
+0.2
stress
R2A with Nickel (II) chloride 0.35 mM
-0.5
-0.1
+0.3
-0.0
-0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.2
+0.2
-0.1
-0.3
-0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.3
-0.1
+0.2
-0.3
-0.2
stress
R2A with nitrate 200 mM
-0.0
+0.4
-0.4
+0.3
-0.3
stress
R2A with copper (II) chloride 0.25 mM
+0.2
+0.2
-0.2
+0.1
-0.3
nitrogen source
Glycine (N)
-0.1
-0.4
+0.2
+0.2
+0.2
stress
R2A with nitrate 150 mM
+0.1
-0.2
-0.2
+0.1
+0.3
nitrogen source
nitrite (N)
-0.4
+0.2
-0.1
+0.4
+0.1
stress
R2A with Cobalt chloride 0.3 mM
+0.2
-0.3
-0.1
+0.5
-0.0
carbon source
Ethanol (C)
+0.1
-0.3
-0.1
+0.3
+0.3
stress
R2A with sodium fluoride 100 mM
+0.2
+0.5
-0.1
-0.1
-0.1
carbon source
L-Proline (C)
+0.4
-0.3
+0.0
+0.1
+0.1
stress
R2A with Cisplatin 0.001 mg/ml
-0.1
-0.1
+0.3
+0.4
-0.2
stress
R2A with Lomefloxacin 0.001 mM
+0.3
-0.5
-0.0
+0.7
+0.3
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.5
+0.6
-0.0
-0.2
-0.1
stress
R2A with Nickel (II) chloride 0.5 mM
+0.4
+0.3
-0.3
+0.4
+0.2
stress
R2A with Cisplatin 0.001 mg/ml
+0.1
+0.4
+0.2
+0.5
+0.1
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