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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS24380 and RR42_RS24385 are separated by 574 nucleotides
RR42_RS24385 and RR42_RS24390 are separated by 37 nucleotides
RR42_RS24390 and RR42_RS24395 are separated by 106 nucleotides
RR42_RS24395 and RR42_RS24400 are separated by 42 nucleotides
RR42_RS24380: RR42_RS24380 - hypothetical protein, at 799,554 to 800,906
_RS24380
RR42_RS24385: RR42_RS24385 - hypothetical protein, at 801,481 to 803,106
_RS24385
RR42_RS24390: RR42_RS24390 - aldehyde dehydrogenase, at 803,144 to 804,577
_RS24390
RR42_RS24395: RR42_RS24395 - hypothetical protein, at 804,684 to 804,872
_RS24395
RR42_RS24400: RR42_RS24400 - hypothetical protein, at 804,915 to 805,292
_RS24400
Group
Condition
RR42
_RS24380
RR42
_RS24385
RR42
_RS24390
RR42
_RS24395
RR42
_RS24400
stress
R2A with Cobalt chloride 0.5 mM
-0.3
-0.1
+0.1
-1.6
-0.3
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
-0.3
-0.2
-0.1
-0.4
-0.5
carbon source
Heptanoic (C)
-0.1
+0.1
+0.0
-1.0
-0.3
stress
R2A with Cobalt chloride 0.3 mM
-0.2
-0.1
+0.1
-0.5
-0.5
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.0
+0.1
+0.2
-1.1
-0.1
carbon source
Valeric (C)
-0.1
-0.2
+0.0
-0.8
+0.0
stress
R2A with Nickel (II) chloride 0.25 mM
+0.0
-0.1
+0.1
-0.7
-0.2
stress
R2A with Vancomycin 0.5 mg/ml
-0.0
+0.3
-0.1
-0.6
-0.4
stress
R2A with Nickel (II) chloride 0.5 mM
+0.2
-0.1
-0.0
-0.7
-0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.1
+0.1
+0.2
-0.8
-0.1
nitrogen source
L-Tryptophan (N)
+0.1
-0.0
+0.0
-0.8
-0.1
carbon source
a-Ketoglutaric (C)
+0.0
+0.2
-0.0
-0.7
-0.1
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-0.1
+0.2
-0.2
-0.5
+0.1
carbon source
Hexanoic (C)
+0.0
+0.1
+0.1
-0.6
-0.1
carbon source
Suberic (C)
-0.0
-0.1
+0.1
-0.6
+0.2
carbon source
Ethanol (C)
+0.0
-0.1
+0.1
-0.6
+0.2
stress
R2A with A22 0.01 mg/ml
+0.1
+0.1
-0.1
-0.5
+0.1
carbon source
Pimelic (C)
+0.1
+0.1
+0.1
-0.6
-0.0
stress
R2A with Nickel (II) chloride 0.25 mM
-0.0
+0.1
-0.0
-0.5
+0.3
temperature
R2A 23C
+0.1
+0.1
+0.0
-0.5
+0.2
carbon source
Protocatechuic Acid (C)
+0.2
+0.2
+0.3
-0.8
+0.2
stress
R2A with Dimethyl Sulfoxide 5 vol%
+0.2
+0.2
+0.1
-0.1
-0.3
r2a
R2A
+0.0
+0.1
+0.1
+0.5
-0.3
stress
R2A with Nickel (II) chloride 0.35 mM
-0.2
-0.1
-0.0
+0.6
+0.3
nitrogen source
L-Tryptophan (N)
-0.1
-0.1
+0.2
+0.9
-0.0
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.1
+0.1
+0.1
+0.4
+0.4
stress
R2A with Lomefloxacin 0.001 mM
+0.2
+0.2
+0.0
+0.9
-0.3
carbon source
Azelaic (C)
+0.0
+0.3
+0.2
+0.5
+0.0
nitrogen source
D-Alanine (N)
+0.1
+0.1
+0.1
+0.6
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.0
+0.3
-0.0
+0.7
+0.3
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RR42_RS24390
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