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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS24255 and RR42_RS24260 are separated by 428 nucleotides
RR42_RS24260 and RR42_RS24265 are separated by 1874 nucleotides
RR42_RS24265 and RR42_RS24270 are separated by 98 nucleotides
RR42_RS24270 and RR42_RS24275 are separated by 108 nucleotides
RR42_RS24255: RR42_RS24255 - hypothetical protein, at 767,663 to 768,619
_RS24255
RR42_RS24260: RR42_RS24260 - hypothetical protein, at 769,048 to 769,824
_RS24260
RR42_RS24265: RR42_RS24265 - hypothetical protein, at 771,699 to 772,415
_RS24265
RR42_RS24270: RR42_RS24270 - hypothetical protein, at 772,514 to 773,482
_RS24270
RR42_RS24275: RR42_RS24275 - hypothetical protein, at 773,591 to 774,478
_RS24275
Group
Condition
RR42
_RS24255
RR42
_RS24260
RR42
_RS24265
RR42
_RS24270
RR42
_RS24275
carbon source
adipate (C)
+0.1
+0.0
-1.0
-0.3
-0.9
carbon source
adipate (C)
+0.2
-0.2
-1.0
-0.4
-0.2
nitrogen source
L-Lysine (N)
-0.0
-0.4
-0.3
-0.3
-0.4
carbon source
Azelaic (C)
-0.1
-0.0
-0.1
-0.3
-0.8
carbon source
Disodium Glutarate (C)
-0.1
-0.1
-0.6
-0.2
-0.5
carbon source
Pimelic (C)
-0.2
+0.2
-0.9
-0.1
-0.1
nitrogen source
L-Leucine (N)
-0.3
-0.5
-0.4
+0.3
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.0
-0.9
-0.3
+0.5
-0.3
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
+0.3
-0.3
-0.4
-0.3
-0.4
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.5
-0.4
-0.1
+0.3
-0.3
carbon source
a-Ketoglutaric (C)
-0.2
-0.3
-0.2
+0.3
-0.4
stress
R2A with Vancomycin 0.5 mg/ml
+0.3
-0.4
-0.1
+0.2
-0.7
stress
R2A with Lomefloxacin 0.001 mM
+0.3
-0.5
-0.1
+0.4
-0.6
carbon source
Protocatechuic Acid (C)
+0.1
+0.3
-0.2
+0.1
-0.7
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.1
-0.7
-0.5
+0.3
+0.6
carbon source
Pimelic (C)
+0.2
+0.4
-0.6
-0.1
-0.2
carbon source
L-Lactate (C)
+0.0
-0.4
-0.3
+0.5
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.4
-0.6
+0.0
+0.4
+0.4
carbon source
Carbon source D,L-Lactate 10 mM
-0.1
-0.4
-0.3
+0.4
+0.3
carbon source
L-Threonine (C)
-0.2
-0.3
-0.3
+0.7
+0.1
carbon source
D,L-Lactate (C)
+0.2
-0.7
+0.0
+0.5
+0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.2
-0.4
-0.1
+0.4
+0.5
carbon source
L-Malic (C)
+0.2
-0.1
-0.3
+0.7
-0.1
stress
R2A with Vancomycin 0.5 mg/ml
-0.3
-0.2
-0.0
+0.2
+0.6
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.4
+0.2
+0.4
+0.2
+0.3
carbon source
L-Histidine (C)
-0.0
+0.0
-0.2
+0.7
+0.4
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.3
-0.0
+0.3
+0.4
+0.5
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.3
+0.4
+0.0
+0.4
+0.2
stress
R2A with Dimethyl Sulfoxide 5 vol%
+0.3
+0.3
+0.3
+0.6
-0.1
lb
LB
+0.5
+0.4
-0.2
+0.2
+0.6
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RR42_RS24265
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