Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS23720 and RR42_RS23725 are separated by 270 nucleotidesRR42_RS23725 and RR42_RS23730 are separated by 13 nucleotidesRR42_RS23730 and RR42_RS23735 are separated by 15 nucleotidesRR42_RS23735 and RR42_RS23740 are separated by 6 nucleotides RR42_RS23720: RR42_RS23720 - hypothetical protein, at 647,414 to 648,286 _RS23720 RR42_RS23725: RR42_RS23725 - phenylacetate-CoA oxygenase, at 648,557 to 649,561 _RS23725 RR42_RS23730: RR42_RS23730 - phenylacetate-CoA oxygenase subunit PaaB, at 649,575 to 649,859 _RS23730 RR42_RS23735: RR42_RS23735 - phenylacetyl-CoA 1,2-epoxidase, structural subunit (EC 1.14.13.149) (from data), at 649,875 to 650,675 _RS23735 RR42_RS23740: RR42_RS23740 - phenylacetate-CoA oxygenase, at 650,682 to 651,248 _RS23740
Group Condition RR42_RS23720 RR42_RS23725 RR42_RS23730 RR42_RS23735 RR42_RS23740
carbon source Carbon source Phenylacetic 2.5 mM +0.1 -3.8 -6.5 -2.9 N.D.
carbon source Carbon source Phenylacetic 2.5 mM +0.4 -2.9 -4.3 -2.9 N.D.
carbon source L-Phenylalanine (C) -0.1 -0.9 -2.0 -0.6 N.D.
carbon source L-Leucine (C) -0.2 -0.9 -1.3 -0.7 N.D.
carbon source L-Leucine (C) -0.2 -0.9 -0.7 -1.0 N.D.
carbon source L-Tryptophan (C) +0.0 -0.7 -1.3 -0.3 N.D.
carbon source L-Alanine (C) -0.4 -0.3 -1.1 -0.4 N.D.
nitrogen source L-Valine (N) -0.3 -0.6 -0.7 -0.4 N.D.
carbon source L-Tryptophan (C) -0.2 -0.5 -0.7 -0.4 N.D.
carbon source L-Alanine (C) -0.1 -0.3 -1.0 -0.3 N.D.
carbon source Ethanol (C) -0.2 -0.3 -0.9 -0.3 N.D.
carbon source D,L-Lactate (C) -0.1 -0.0 -1.4 -0.1 N.D.
carbon source Pimelic (C) -0.2 -0.4 -0.5 -0.4 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.4 -0.0 -0.9 -0.1 N.D.
nitrogen source L-Valine (N) -0.2 -0.1 -0.8 -0.2 N.D.
carbon source Disodium Glutarate (C) -0.1 +0.1 -0.7 -0.4 N.D.
carbon source adipate (C) -0.1 +0.1 -1.1 +0.2 N.D.
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.0 -0.7 +0.2 -0.4 N.D.
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.4 +0.5 -0.7 -0.0 N.D.
carbon source Hexanoic (C) -0.1 +0.6 -0.8 +0.1 N.D.
carbon source Suberic (C) -0.2 +0.3 -0.8 +0.5 N.D.
nitrogen source L-Glutamine (N) +0.0 -0.2 +0.7 -0.5 N.D.
stress R2A with Doxycycline hyclate 0.0001 mg/ml +0.2 -0.2 +0.8 -0.3 N.D.
carbon source Protocatechuic Acid (C) -0.5 +1.4 -0.7 +0.4 N.D.
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.2 +0.2 +1.0 -0.2 N.D.
carbon source Protocatechuic Acid (C) -0.2 +1.3 -0.6 +0.5 N.D.
stress R2A with Polymyxin B sulfate 0.005 mg/ml +0.3 -0.1 +0.9 -0.1 N.D.
stress R2A with Nickel (II) chloride 0.35 mM -0.4 +0.5 +0.9 +0.1 N.D.
lb LB +0.4 -0.1 +1.0 -0.0 N.D.
stress R2A with Paraquat dichloride 0.064 mg/ml +0.2 +0.2 +1.2 +0.0 N.D.
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