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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS23655 and RR42_RS23660 are separated by 214 nucleotides
RR42_RS23660 and RR42_RS23665 are separated by 955 nucleotides
RR42_RS23665 and RR42_RS23670 are separated by 372 nucleotides
RR42_RS23670 and RR42_RS23675 are separated by 46 nucleotides
RR42_RS23655: RR42_RS23655 - flagellin, at 632,120 to 633,448
_RS23655
RR42_RS23660: RR42_RS23660 - hypothetical protein, at 633,663 to 633,986
_RS23660
RR42_RS23665: RR42_RS23665 - histidine kinase, at 634,942 to 637,023
_RS23665
RR42_RS23670: RR42_RS23670 - DSBA oxidoreductase, at 637,396 to 638,883
_RS23670
RR42_RS23675: RR42_RS23675 - hypothetical protein, at 638,930 to 639,271
_RS23675
Group
Condition
RR42
_RS23655
RR42
_RS23660
RR42
_RS23665
RR42
_RS23670
RR42
_RS23675
nitrogen source
casaminos (N)
-0.7
-0.7
-0.6
-0.7
-0.8
nitrogen source
Glucuronamide (N)
-0.7
-0.7
-0.7
-0.7
-0.8
stress
R2A with Dimethyl Sulfoxide 5 vol%
-0.4
-0.5
-0.7
-0.6
-0.8
nitrogen source
L-Serine (N)
-0.7
-0.4
-0.7
-0.5
-0.5
stress
R2A with Nickel (II) chloride 0.35 mM
-0.1
-0.1
-0.6
-0.2
-1.6
r2a
R2A
-0.7
-0.4
-0.7
-0.4
-0.4
temperature
R2A 23C
-0.4
-0.3
-0.6
-0.6
-0.4
temperature
R2A 23C
-0.4
-0.2
-0.6
-0.4
-0.4
stress
R2A with Lomefloxacin 0.00075 mM
-0.2
-0.6
-0.4
-0.3
-0.6
stress
R2A with Cephalothin 0.25 mg/ml
-0.4
-0.4
-0.6
-0.3
-0.3
nitrogen source
L-Glutamine (N)
-0.4
-0.4
-0.4
-0.2
-0.7
stress
R2A with nitrate 200 mM
-0.2
-0.2
-0.6
-0.3
-0.6
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.5
-0.2
-0.5
-0.2
+0.0
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.1
-0.4
+0.0
-0.1
-0.7
nitrogen source
L-Isoleucine (N)
-0.5
-0.3
-0.1
-0.2
-0.3
nitrogen source
nitrate (N)
-0.4
-0.2
+0.0
-0.2
-0.5
stress
R2A with Cisplatin 0.001 mg/ml
-0.4
+0.0
-0.2
-0.4
-0.1
stress
R2A with Lomefloxacin 0.001 mM
-0.1
-0.2
-0.5
-0.5
+0.3
carbon source
Carbon source D,L-Lactate 10 mM
+0.1
-0.0
-0.3
+0.3
-0.5
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
+0.2
-0.2
+0.3
-0.1
-0.6
carbon source
Azelaic (C)
+0.5
-0.3
-0.2
+0.1
-0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.1
+0.0
-0.2
-0.2
+0.6
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
+0.3
+0.0
+0.3
+0.2
+0.3
lb
LB
+0.6
+0.2
+0.0
+0.2
+0.4
r2a
R2A
+0.1
+0.2
+0.4
+0.3
+0.7
stress
R2A with Nickel (II) chloride 0.25 mM
+0.3
+0.2
+0.5
+0.5
+0.3
oxygen_nitrate
exometabolites; 10% oxygen; 5 mM nitrate
+0.4
+0.3
+0.3
+0.3
+0.5
stress
R2A with nitrate 150 mM
+0.5
+0.1
+0.4
+0.3
+0.6
stress
R2A with Nickel (II) chloride 0.5 mM
+0.2
+0.5
+0.6
+0.4
+0.3
stress
R2A with Cobalt chloride 0.3 mM
+0.4
+0.5
+0.4
+0.2
+0.9
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RR42_RS23665
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