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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS23630 and RR42_RS23635 are separated by 293 nucleotides
RR42_RS23635 and RR42_RS23640 are separated by 1 nucleotides
RR42_RS23640 and RR42_RS23645 are separated by 50 nucleotides
RR42_RS23645 and RR42_RS23650 are separated by 84 nucleotides
RR42_RS23630: RR42_RS23630 - hypothetical protein, at 627,967 to 628,956
_RS23630
RR42_RS23635: RR42_RS23635 - flagellar assembly protein FliT, at 629,250 to 629,585
_RS23635
RR42_RS23640: RR42_RS23640 - flagellar biosynthesis protein FliS, at 629,587 to 630,033
_RS23640
RR42_RS23645: RR42_RS23645 - flagellar hook protein, at 630,084 to 631,514
_RS23645
RR42_RS23650: RR42_RS23650 - flagellar protein, at 631,599 to 631,976
_RS23650
Group
Condition
RR42
_RS23630
RR42
_RS23635
RR42
_RS23640
RR42
_RS23645
RR42
_RS23650
temperature
R2A 23C
-0.7
-0.5
-0.3
-0.4
-1.7
stress
R2A with Dimethyl Sulfoxide 5 vol%
-1.0
-0.9
-0.4
-0.5
-0.8
nitrogen source
casaminos (N)
-0.5
-0.4
-0.6
-0.6
-0.6
stress
R2A with Cisplatin 0.001 mg/ml
-0.5
-1.3
-0.4
-0.1
-0.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.9
-0.9
-0.2
-0.1
-0.2
carbon source
Azelaic (C)
+0.1
-2.1
-0.2
-0.1
+0.1
carbon source
Valeric (C)
-0.1
-1.0
-0.2
-0.1
-0.8
carbon source
D,L-Lactate (C)
-0.4
-0.3
+0.3
-0.2
-1.6
r2a
R2A
-0.4
-0.8
+0.2
-0.5
-0.5
nitrogen source
L-Serine (N)
-0.6
-0.4
-0.3
-0.5
-0.2
stress
R2A with Cephalothin 0.25 mg/ml
-0.2
-1.0
+0.1
-0.1
-0.8
temperature
R2A 23C
-0.6
-0.2
+0.1
-0.4
-0.9
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.5
+0.3
+0.2
+0.1
-1.8
nitrogen source
Glucuronamide (N)
-0.2
-0.7
-0.4
-0.5
+0.2
stress
R2A with Vancomycin 0.5 mg/ml
-0.2
-0.5
+0.1
+0.1
-1.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
-0.8
+0.3
-0.1
-0.7
carbon source
L-Lactate (C)
-0.1
-0.9
+0.5
+0.0
-0.4
stress
R2A with Cobalt chloride 0.5 mM
-0.0
+0.6
+0.3
+0.0
-1.8
nitrogen source
nitrate (N)
-0.5
-0.7
-0.2
-0.0
+0.6
carbon source
adipate (C)
+0.5
+0.2
-0.5
-0.0
-0.9
carbon source
4-Hydroxybenzoic Acid (C)
-0.2
-0.4
+0.7
+0.0
-0.8
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.1
-1.0
+0.3
-0.1
+0.5
lb
LB
+0.5
+0.6
-1.7
-0.4
+1.1
stress
R2A with Lomefloxacin 0.001 mM
-0.7
+0.1
-0.2
-0.3
+1.5
carbon source
Suberic (C)
+0.5
+0.9
-0.1
+0.0
-0.6
stress
R2A with Cobalt chloride 0.3 mM
-0.2
-0.2
+0.1
+0.4
+1.0
carbon source
Hexanoic (C)
+0.7
+0.0
+0.1
-0.2
+1.1
stress
R2A with nitrate 200 mM
+0.6
+0.9
+0.2
+0.4
-0.1
stress
R2A with Nickel (II) chloride 0.25 mM
+0.3
+0.5
+0.3
+0.2
+0.6
stress
R2A with Nickel (II) chloride 0.35 mM
+0.4
+1.2
+0.0
+0.2
+1.0
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RR42_RS23640
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