Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS23170 and RR42_RS23175 are separated by 192 nucleotidesRR42_RS23175 and RR42_RS23180 are separated by 219 nucleotidesRR42_RS23180 and RR42_RS23185 are separated by 233 nucleotidesRR42_RS23185 and RR42_RS23190 are separated by 120 nucleotides RR42_RS23170: RR42_RS23170 - LysR family transcriptional regulator, at 530,650 to 531,585 _RS23170 RR42_RS23175: RR42_RS23175 - mandelate racemase, at 531,778 to 532,947 _RS23175 RR42_RS23180: RR42_RS23180 - ligand-gated channel, at 533,167 to 535,353 _RS23180 RR42_RS23185: RR42_RS23185 - membrane protein, at 535,587 to 536,636 _RS23185 RR42_RS23190: RR42_RS23190 - membrane protein, at 536,757 to 537,284 _RS23190
Group Condition RR42_RS23170 RR42_RS23175 RR42_RS23180 RR42_RS23185 RR42_RS23190
temperature R2A 37C -0.0 -0.1 -0.1 -0.3 -0.3
stress R2A with nitrate 150 mM -0.4 -0.1 +0.1 -0.1 -0.2
lb LB -0.2 -0.3 -0.3 +0.1 -0.1
stress R2A with Cobalt chloride 0.5 mM -0.2 -0.4 +0.3 -0.0 -0.2
stress R2A with D-Cycloserine 0.5 mg/ml -0.2 +0.1 -0.3 +0.2 -0.3
carbon source D,L-Lactate (C) -0.1 -0.2 +0.2 +0.0 -0.4
stress R2A with Lomefloxacin 0.001 mM +0.3 -0.1 -0.0 -0.2 -0.5
carbon source Azelaic (C) -0.0 +0.2 -0.0 -0.6 +0.1
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.1 -0.3 +0.0 +0.4 -0.3
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate -0.4 +0.2 +0.0 -0.2 +0.1
stress R2A with Nickel (II) chloride 0.5 mM -0.4 -0.2 +0.2 +0.2 +0.1
carbon source succinate (C) -0.1 +0.2 -0.1 +0.2 -0.3
carbon source L-Histidine (C) -0.0 +0.1 -0.1 +0.3 -0.3
stress R2A with Cobalt chloride 0.3 mM -0.3 +0.1 +0.3 -0.0 +0.0
carbon source Protocatechuic Acid (C) +0.3 -0.2 -0.0 +0.3 -0.1
stress R2A with Cephalothin 0.25 mg/ml +0.3 +0.1 +0.2 -0.3 -0.0
nitrogen source L-Glutamine (N) +0.4 +0.1 -0.1 -0.3 +0.2
carbon source L-Alanine (C) -0.2 +0.2 +0.0 +0.5 -0.0
stress R2A with Chlorite 4 mM -0.1 +0.0 +0.1 +0.4 -0.1
nitrogen source L-Asparagine (N) -0.1 -0.1 +0.0 +0.5 +0.0
carbon source D-Fructose (C) -0.2 +0.1 +0.1 +0.5 -0.0
nitrogen source L-Valine (N) -0.1 +0.1 -0.1 +0.5 +0.1
carbon source L-Tryptophan (C) +0.1 +0.2 +0.1 +0.3 -0.1
carbon source Ethanol (C) -0.2 +0.0 +0.2 +0.2 +0.2
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.1 -0.1 -0.1 +0.9 -0.0
nitrogen source L-Leucine (N) +0.3 +0.1 -0.1 +0.2 +0.1
carbon source L-Leucine (C) -0.1 +0.2 +0.0 +0.6 -0.1
stress R2A with Sisomicin 0.035 mg/ml +0.1 -0.1 +0.0 +0.5 +0.1
stress R2A with Paraquat dichloride 0.064 mg/ml +0.2 -0.1 +0.1 +0.5 +0.1
stress R2A with Polymyxin B sulfate 0.005 mg/ml +0.2 -0.1 +0.4 +0.3 +0.2
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