Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS23065 and RR42_RS23070 are separated by 162 nucleotidesRR42_RS23070 and RR42_RS23075 are separated by 31 nucleotidesRR42_RS23075 and RR42_RS23080 are separated by 204 nucleotidesRR42_RS23080 and RR42_RS23085 are separated by 159 nucleotides RR42_RS23065: RR42_RS23065 - L-rhamnose 1-epimerase, at 509,085 to 510,260 _RS23065 RR42_RS23070: RR42_RS23070 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 510,423 to 511,454 _RS23070 RR42_RS23075: RR42_RS23075 - ABC transporter substrate-binding protein, at 511,486 to 512,451 _RS23075 RR42_RS23080: RR42_RS23080 - LysR family transcriptional regulator, at 512,656 to 513,591 _RS23080 RR42_RS23085: RR42_RS23085 - cytochrome C biogenesis protein CcdA, at 513,751 to 514,677 _RS23085
Group Condition RR42_RS23065 RR42_RS23070 RR42_RS23075 RR42_RS23080 RR42_RS23085
lb LB +0.5 -0.9 -0.2 -2.0 -1.0
carbon source Octanoic (C) -0.2 -1.2 +0.2 -0.5 +0.1
nitrogen source D-Alanine (N) -0.1 -0.4 -0.4 -0.2 -0.1
carbon source Pimelic (C) -0.1 -0.7 +0.2 -0.5 -0.2
carbon source Protocatechuic Acid (C) -0.0 -0.7 +0.3 -0.7 -0.2
carbon source Azelaic (C) +0.2 -0.6 +0.1 -0.7 -0.0
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate -0.0 -0.7 +0.1 -0.3 -0.1
stress R2A with Paraquat dichloride 0.064 mg/ml -0.0 +0.2 -0.5 +0.0 -0.6
carbon source Suberic (C) +0.0 -0.7 -0.1 +0.2 -0.4
stress R2A with Nickel (II) chloride 0.25 mM -0.1 -0.2 -0.3 +0.1 -0.4
carbon source Valeric (C) -0.1 -0.4 -0.0 +0.2 -0.5
carbon source propionate (C) +0.1 -0.5 +0.1 -0.2 -0.3
carbon source a-Ketoglutaric (C) +0.1 -0.5 -0.3 +0.4 -0.5
carbon source propionate (C) +0.1 -0.5 +0.1 -0.1 -0.3
nitrogen source L-Valine (N) -0.2 -0.4 -0.3 +0.2 -0.0
carbon source Suberic (C) +0.2 -0.3 -0.0 -0.5 +0.1
nitrogen source L-Isoleucine (N) +0.0 -0.9 +0.1 +0.3 -0.1
carbon source Disodium Glutarate (C) +0.1 -0.4 +0.2 +0.0 -0.4
nitrogen source L-Leucine (N) -0.1 -0.3 +0.2 +0.1 -0.4
carbon source L-Lactate (C) -0.1 -0.4 -0.2 +0.4 -0.1
stress R2A with sodium fluoride 100 mM -0.0 -0.5 +0.0 +0.4 -0.2
carbon source a-Ketoglutaric (C) +0.0 -0.4 +0.0 +0.3 -0.2
carbon source D-Lactate (C) +0.2 -0.5 -0.2 +0.3 +0.1
carbon source Azelaic (C) +0.0 -0.8 +0.2 +0.2 +0.3
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.1 -0.0 -0.3 +0.4 +0.2
stress R2A with Chloride 300 mM -0.1 +0.3 +0.2 +0.1 -0.3
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM +0.0 +0.3 -0.2 +0.6 +0.0
stress R2A with Lomefloxacin 0.001 mM -0.4 +0.3 +0.1 +0.2 +0.4
nitrogen source Glucuronamide (N) +0.0 -0.3 +0.1 +0.6 +0.2
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.1 +0.1 -0.1 +0.5 +0.5
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RR42_RS23065
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RR42_RS23070
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RR42_RS23085
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