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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS22230 and RR42_RS22235 are separated by 16 nucleotides
RR42_RS22235 and RR42_RS22240 are separated by 821 nucleotides
RR42_RS22240 and RR42_RS22245 are separated by 364 nucleotides
RR42_RS22245 and RR42_RS22250 are separated by 25 nucleotides
RR42_RS22230: RR42_RS22230 - hypothetical protein, at 325,385 to 326,239
_RS22230
RR42_RS22235: RR42_RS22235 - peptidase M19, at 326,256 to 326,885
_RS22235
RR42_RS22240: RR42_RS22240 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 327,707 to 329,008
_RS22240
RR42_RS22245: RR42_RS22245 - cytochrome C biogenesis protein, at 329,373 to 330,320
_RS22245
RR42_RS22250: RR42_RS22250 - hypothetical protein, at 330,346 to 330,642
_RS22250
Group
Condition
RR42
_RS22230
RR42
_RS22235
RR42
_RS22240
RR42
_RS22245
RR42
_RS22250
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-4.2
-0.0
+0.3
+0.3
+0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-1.6
-0.5
+0.2
-1.0
-0.4
carbon source
succinate (C)
-2.1
+0.0
-0.2
-0.2
-0.7
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-2.4
-0.5
+0.2
+0.3
+0.1
carbon source
Azelaic (C)
-1.9
-0.2
+0.3
+0.0
-0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.5
-0.8
+0.3
-0.1
-1.0
nitrogen source
nitrate (N)
-1.7
+0.1
+0.1
+0.0
-0.6
stress
R2A with Lomefloxacin 0.001 mM
+0.2
-1.2
+0.1
-0.4
-0.6
carbon source
Octanoic (C)
-2.0
-0.1
-0.6
+0.3
+0.5
carbon source
L-Histidine (C)
-1.7
-0.4
-0.1
+0.1
+0.3
stress
R2A with A22 0.01 mg/ml
-1.3
-0.1
+0.1
+0.3
-0.7
r2a
R2A
-1.8
+0.1
+0.7
-0.2
+0.1
carbon source
Suberic (C)
-1.6
-0.6
+0.4
+0.3
+0.4
carbon source
Heptanoic (C)
-1.8
-0.2
+0.4
+0.2
+0.4
carbon source
Heptanoic (C)
-1.3
-0.3
-0.1
+0.7
+0.2
stress
R2A with D-Cycloserine 0.5 mg/ml
+1.6
+0.0
+0.5
-0.5
-2.1
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.6
-0.1
+0.4
+0.2
-1.5
stress
R2A with Chloride 300 mM
-0.3
-0.6
+0.4
-0.5
+0.7
carbon source
Azelaic (C)
-0.9
-0.2
+0.9
-0.2
+0.5
temperature
R2A 23C
-1.1
+0.2
+0.4
+0.1
+0.6
carbon source
Pimelic (C)
+0.8
-0.4
+0.3
+0.3
-0.7
stress
R2A with Thallium(I) acetate 0.001 mg/ml
+1.5
-0.1
+0.6
-0.3
-1.0
carbon source
4-Hydroxybenzoic Acid (C)
+1.2
-0.3
+0.5
+0.4
-0.5
stress
R2A with Zinc 0.1 mM
+1.6
-0.2
+0.2
-0.4
+0.2
stress
R2A with copper (II) chloride 0.25 mM
+2.0
-0.2
+0.4
-0.0
-0.4
carbon source
L-Histidine (C)
+1.5
-0.4
+0.3
+0.7
-0.2
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
+2.1
-0.1
-0.3
-0.1
+0.2
lb
LB
+1.3
-0.4
+0.3
-0.7
+1.3
stress
R2A with Vancomycin 0.5 mg/ml
+1.3
+0.3
+0.0
+0.9
-0.6
nitrogen source
L-Glutamine (N)
+1.1
-0.1
+0.7
+0.2
+1.0
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