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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS21870 and RR42_RS21875 are separated by 56 nucleotides
RR42_RS21875 and RR42_RS21880 are separated by 73 nucleotides
RR42_RS21880 and RR42_RS21885 are separated by 1 nucleotides
RR42_RS21885 and RR42_RS21890 are separated by 36 nucleotides
RR42_RS21870: RR42_RS21870 - transcriptional regulator, at 232,726 to 233,607
_RS21870
RR42_RS21875: RR42_RS21875 - hypothetical protein, at 233,664 to 233,855
_RS21875
RR42_RS21880: RR42_RS21880 - heavy metal resistance protein CzcA, at 233,929 to 237,024
_RS21880
RR42_RS21885: RR42_RS21885 - RND transporter MFP subunit, at 237,026 to 238,192
_RS21885
RR42_RS21890: RR42_RS21890 - transporter, at 238,229 to 239,455
_RS21890
Group
Condition
RR42
_RS21870
RR42
_RS21875
RR42
_RS21880
RR42
_RS21885
RR42
_RS21890
stress
R2A with Nickel (II) chloride 0.35 mM
-0.7
N.D.
-0.4
-0.6
-1.1
stress
R2A with Cobalt chloride 0.5 mM
-0.7
N.D.
-0.4
+0.0
-0.6
stress
R2A with Nickel (II) chloride 0.5 mM
-0.1
N.D.
-0.4
-0.5
-0.7
carbon source
Trisodium citrate (C)
-0.1
N.D.
-0.3
-0.3
-0.3
stress
R2A with Cisplatin 0.001 mg/ml
-0.7
N.D.
-0.2
-0.1
+0.1
lb
LB
+0.3
N.D.
-0.1
-0.2
-0.8
carbon source
a-Ketoglutaric (C)
-0.2
N.D.
-0.1
+0.3
-0.5
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.6
N.D.
+0.0
+0.2
-0.0
temperature
R2A 23C
-0.1
N.D.
-0.1
+0.3
-0.5
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-0.2
N.D.
-0.3
+0.2
-0.1
carbon source
L-Lactate (C)
-0.2
N.D.
+0.0
+0.3
-0.4
stress
R2A with Paraquat dichloride 0.064 mg/ml
-0.3
N.D.
+0.3
-0.4
+0.0
carbon source
L-Histidine (C)
-0.4
N.D.
+0.1
+0.2
-0.1
stress
R2A with Zinc 0.1 mM
-0.4
N.D.
+0.2
-0.1
+0.2
carbon source
adipate (C)
+0.2
N.D.
-0.1
+0.2
-0.3
carbon source
succinate (C)
+0.4
N.D.
-0.1
-0.3
+0.0
carbon source
L-Threonine (C)
-0.0
N.D.
+0.2
+0.3
-0.3
carbon source
Valeric (C)
+0.3
N.D.
+0.1
-0.2
+0.3
nitrogen source
L-Threonine (N)
+0.3
N.D.
+0.0
-0.3
+0.4
carbon source
Protocatechuic Acid (C)
+0.7
N.D.
-0.0
-0.1
-0.0
nitrogen source
L-Leucine (N)
+0.3
N.D.
-0.2
-0.1
+0.6
nitrogen source
L-Phenylalanine (N)
+0.4
N.D.
-0.0
+0.2
+0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.1
N.D.
+0.2
+0.5
+0.3
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.2
N.D.
+0.1
+0.4
+0.1
carbon source
adipate (C)
+0.5
N.D.
+0.0
+0.2
+0.1
r2a
R2A
+0.3
N.D.
+0.2
+0.3
+0.0
carbon source
Valeric (C)
+0.4
N.D.
+0.3
+0.2
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.1
N.D.
+0.3
+0.5
+0.0
carbon source
Heptanoic (C)
+0.1
N.D.
+0.1
+0.7
+0.0
carbon source
Azelaic (C)
+0.3
N.D.
+0.1
+0.6
+0.1
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