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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS21415 and RR42_RS21420 are separated by 160 nucleotides
RR42_RS21420 and RR42_RS21425 are separated by 149 nucleotides
RR42_RS21425 and RR42_RS21430 are separated by 12 nucleotides
RR42_RS21430 and RR42_RS21435 are separated by 345 nucleotides
RR42_RS21415: RR42_RS21415 - hypothetical protein, at 134,240 to 134,638
_RS21415
RR42_RS21420: RR42_RS21420 - acyl-CoA dehydrogenase, at 134,799 to 135,956
_RS21420
RR42_RS21425: RR42_RS21425 - hypothetical protein, at 136,106 to 136,963
_RS21425
RR42_RS21430: RR42_RS21430 - alpha-ketoglutarate permease, at 136,976 to 138,286
_RS21430
RR42_RS21435: RR42_RS21435 - hypothetical protein, at 138,632 to 139,015
_RS21435
Group
Condition
RR42
_RS21415
RR42
_RS21420
RR42
_RS21425
RR42
_RS21430
RR42
_RS21435
carbon source
adipate (C)
-0.3
-3.0
-2.1
-1.5
-0.2
carbon source
adipate (C)
-0.6
-3.6
-1.7
-1.5
+0.2
carbon source
Dodecandioic (C)
-0.3
-3.5
-0.9
+0.0
-1.1
carbon source
Dodecandioic (C)
-0.2
-3.4
-0.5
-0.0
-1.2
carbon source
Suberic (C)
-0.0
-3.4
-0.2
+0.0
-1.2
carbon source
Azelaic (C)
-0.1
-0.0
-0.3
-0.1
-3.8
carbon source
Suberic (C)
-0.1
-3.2
-0.2
-0.1
-0.7
carbon source
Heptanoic (C)
-0.3
+0.2
-0.2
-0.2
-2.9
carbon source
L-Proline (C)
-0.1
+0.0
-0.3
+0.2
-2.1
stress
R2A with Vancomycin 0.5 mg/ml
-0.1
+0.3
+0.2
-0.1
-2.4
carbon source
L-Histidine (C)
-0.1
-0.2
-0.3
-0.0
-1.5
carbon source
Carbon source Phenylacetic 2.5 mM
-0.1
-1.5
-0.2
-0.0
-0.2
carbon source
D-Gluconic Acid (C)
+0.0
-0.2
-0.4
-0.0
-1.5
nitrogen source
L-Valine (N)
+0.1
+0.1
-0.1
-0.1
-2.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.2
-0.2
+0.1
+0.0
-2.0
stress
R2A with Paraquat dichloride 0.064 mg/ml
-0.0
+0.2
-0.0
-0.1
-1.9
stress
R2A with Cisplatin 0.001 mg/ml
+0.6
+0.2
+0.1
-0.0
-2.6
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.1
-0.1
+0.2
-0.2
-1.6
carbon source
Octanoic (C)
-0.1
+0.1
+0.0
+0.1
-1.6
carbon source
a-Ketoglutaric (C)
+0.3
+0.1
+0.1
-0.0
-1.7
carbon source
Heptanoic (C)
-0.6
+0.2
+0.2
+0.0
-1.1
lb
LB
+0.3
+0.3
-0.1
-0.0
-1.4
nitrogen source
L-Valine (N)
+0.5
+0.1
-0.2
-0.0
-1.3
carbon source
Protocatechuic Acid (C)
-0.6
+0.2
+0.4
-0.0
-0.7
nitrogen source
Glucuronamide (N)
+0.3
+0.1
+0.3
-0.0
-1.4
stress
R2A with Nickel (II) chloride 0.35 mM
-0.1
+0.1
-0.0
-0.1
+1.5
stress
R2A with Nickel (II) chloride 0.35 mM
-0.6
-0.1
+0.1
+0.0
+2.4
stress
R2A with Cobalt chloride 0.5 mM
-0.0
+0.1
-0.2
-0.1
+2.2
stress
R2A with Nickel (II) chloride 0.5 mM
-0.5
-0.1
-0.3
-0.1
+3.2
stress
R2A with Cobalt chloride 0.3 mM
-0.0
-0.1
-0.0
-0.1
+3.4
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