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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS21310 and RR42_RS21315 are separated by 241 nucleotides
RR42_RS21315 and RR42_RS21320 are separated by 8 nucleotides
RR42_RS21320 and RR42_RS21325 are separated by 24 nucleotides
RR42_RS21325 and RR42_RS21330 are separated by 101 nucleotides
RR42_RS21310: RR42_RS21310 - hypothetical protein, at 107,388 to 108,449
_RS21310
RR42_RS21315: RR42_RS21315 - ethanolamine permease, at 108,691 to 110,139
_RS21315
RR42_RS21320: RR42_RS21320 - ethanolamine ammonia-lyase, at 110,148 to 111,530
_RS21320
RR42_RS21325: RR42_RS21325 - ethanolamine ammonia-lyase, at 111,555 to 112,367
_RS21325
RR42_RS21330: RR42_RS21330 - phosphoserine phosphatase, at 112,469 to 113,758
_RS21330
Group
Condition
RR42
_RS21310
RR42
_RS21315
RR42
_RS21320
RR42
_RS21325
RR42
_RS21330
carbon source
Protocatechuic Acid (C)
-0.6
-0.0
-0.3
-0.5
-0.0
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.2
-0.3
-0.4
-0.2
-0.2
stress
R2A with Zinc 0.1 mM
-0.4
-0.1
-0.2
-0.2
-0.2
carbon source
Dodecandioic (C)
-0.3
+0.0
-0.2
-0.6
-0.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.2
-0.1
-0.6
+0.1
-0.4
carbon source
D,L-Lactate (C)
-0.7
-0.0
+0.0
-0.4
+0.1
stress
R2A with Cisplatin 0.001 mg/ml
-0.5
-0.2
+0.1
-0.2
-0.2
carbon source
Azelaic (C)
-0.2
+0.1
-0.4
-0.6
+0.2
r2a
R2A
-0.5
-0.2
-0.1
-0.3
+0.2
carbon source
Valeric (C)
-0.8
+0.1
-0.2
-0.1
+0.2
stress
R2A with Lomefloxacin 0.001 mM
-1.0
+0.0
-0.1
-0.1
+0.5
nitrogen source
L-Glutamine (N)
+0.0
+0.0
-0.6
+0.3
-0.4
carbon source
L-Histidine (C)
-0.3
+0.1
-0.3
-0.2
+0.2
carbon source
Octanoic (C)
-0.4
-0.2
+0.1
-0.2
+0.2
stress
R2A with Cisplatin 0.001 mg/ml
+0.1
+0.1
-0.8
+0.1
+0.1
stress
R2A with Chloride 300 mM
-0.3
+0.0
-0.7
+0.6
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.4
-0.3
-0.4
+0.1
+0.0
stress
R2A with Nickel (II) chloride 0.5 mM
-0.5
-0.2
+0.9
-0.5
+0.1
stress
R2A with Sisomicin 0.035 mg/ml
-0.4
-0.0
-0.3
+0.3
+0.3
carbon source
Carbon source Phenylacetic 2.5 mM
-0.3
-0.2
-0.1
+0.5
+0.1
carbon source
Protocatechuic Acid (C)
-0.1
-0.2
+0.2
-0.3
+0.4
nitrogen source
L-Tryptophan (N)
-0.1
+0.1
-0.4
+0.4
+0.1
stress
R2A with Cobalt chloride 0.5 mM
+0.1
-0.3
-0.1
+0.3
+0.3
oxygen_nitrate
exometabolites; 5% oxygen; 5 mM nitrate
+0.2
-0.1
-0.2
+0.6
-0.2
carbon source
Heptanoic (C)
-0.4
+0.1
+0.2
+0.2
+0.3
stress
R2A with Nickel (II) chloride 0.35 mM
+0.2
-0.2
+0.6
-0.2
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.2
-0.0
+0.2
+0.3
+0.5
stress
R2A with Chloride 300 mM
-0.1
-0.0
-0.1
+0.7
+0.4
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.5
+0.2
-0.1
+0.3
+0.1
stress
R2A with Cobalt chloride 0.3 mM
-0.1
-0.1
+0.5
+0.7
+0.2
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RR42_RS21320
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