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Gene
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Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS21005 and RR42_RS21010 are separated by 46 nucleotides
RR42_RS21010 and RR42_RS21015 are separated by 94 nucleotides
RR42_RS21015 and RR42_RS21020 are separated by 230 nucleotides
RR42_RS21020 and RR42_RS21025 are separated by 70 nucleotides
RR42_RS21005: RR42_RS21005 - GDP-L-fucose synthase, at 40,805 to 41,797
_RS21005
RR42_RS21010: RR42_RS21010 - GDP-mannose 4,6-dehydratase, at 41,844 to 42,956
_RS21010
RR42_RS21015: RR42_RS21015 - mannose-1-phosphate guanyltransferase, at 43,051 to 44,475
_RS21015
RR42_RS21020: RR42_RS21020 - hypothetical protein, at 44,706 to 45,038
_RS21020
RR42_RS21025: RR42_RS21025 - lipoprotein, at 45,109 to 45,228
_RS21025
Group
Condition
RR42
_RS21005
RR42
_RS21010
RR42
_RS21015
RR42
_RS21020
RR42
_RS21025
nitrogen source
L-Glutamine (N)
-0.4
-0.3
-0.6
-0.9
N.D.
lb
LB
-0.7
+0.1
-0.4
-0.7
N.D.
carbon source
Pimelic (C)
-0.6
-0.2
-0.2
-0.5
N.D.
nitrogen source
casaminos (N)
-0.0
-0.1
-0.1
-1.2
N.D.
stress
R2A with sodium fluoride 100 mM
-0.1
-0.4
-0.0
-0.8
N.D.
carbon source
Octanoic (C)
-0.7
+0.1
-0.1
-0.5
N.D.
carbon source
succinate (C)
-0.3
-0.1
+0.2
-0.5
N.D.
carbon source
Azelaic (C)
-0.4
+0.1
+0.1
-0.5
N.D.
carbon source
Valeric (C)
-0.3
+0.1
+0.1
-0.5
N.D.
temperature
R2A 37C
-0.3
+0.0
+0.3
-0.6
N.D.
carbon source
pyruvate (C)
-0.4
-0.2
-0.3
+0.4
N.D.
carbon source
Hexanoic (C)
-0.5
-0.0
+0.5
-0.4
N.D.
carbon source
Azelaic (C)
+0.0
+0.2
+0.4
-1.0
N.D.
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
-0.3
+0.4
-0.5
N.D.
nitrogen source
L-Asparagine (N)
-0.3
-0.3
+0.2
+0.3
N.D.
carbon source
Disodium Glutarate (C)
-0.3
+0.1
+0.4
-0.4
N.D.
carbon source
Heptanoic (C)
-0.4
-0.1
+0.2
+0.4
N.D.
stress
R2A with Nickel (II) chloride 0.35 mM
+0.6
+0.2
-0.2
-0.5
N.D.
carbon source
L-Alanine (C)
-0.4
-0.1
+0.2
+0.6
N.D.
carbon source
adipate (C)
-0.0
+0.4
+0.5
-0.5
N.D.
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.6
-0.2
+0.2
+0.1
N.D.
carbon source
L-Phenylalanine (C)
-0.2
+0.1
+0.6
+0.3
N.D.
carbon source
Disodium Glutarate (C)
-0.2
+0.3
+0.5
+0.2
N.D.
stress
R2A with Lomefloxacin 0.001 mM
+0.7
+0.2
+0.4
-0.2
N.D.
carbon source
L-Leucine (C)
+0.1
+0.0
+0.5
+0.5
N.D.
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.2
+0.1
+0.1
+0.7
N.D.
r2a
R2A
+0.4
+0.1
+0.5
+0.1
N.D.
carbon source
L-Proline (C)
+0.2
+0.3
+1.0
-0.2
N.D.
carbon source
adipate (C)
+0.0
+0.4
+1.1
-0.1
N.D.
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.7
+0.4
+0.3
+0.4
N.D.
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