Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS20440 and RR42_RS20445 overlap by 4 nucleotidesRR42_RS20445 and RR42_RS20450 are separated by 175 nucleotidesRR42_RS20450 and RR42_RS20455 are separated by 232 nucleotidesRR42_RS20455 and RR42_RS20460 are separated by 185 nucleotides RR42_RS20440: RR42_RS20440 - histidine kinase, at 4,426,814 to 4,429,282 _RS20440 RR42_RS20445: RR42_RS20445 - hypothetical protein, at 4,429,279 to 4,429,998 _RS20445 RR42_RS20450: RR42_RS20450 - 16S rRNA methyltransferase, at 4,430,174 to 4,431,526 _RS20450 RR42_RS20455: RR42_RS20455 - protease HtpX, at 4,431,759 to 4,432,619 _RS20455 RR42_RS20460: RR42_RS20460 - lysine transporter LysE, at 4,432,805 to 4,433,446 _RS20460
Group Condition RR42_RS20440 RR42_RS20445 RR42_RS20450 RR42_RS20455 RR42_RS20460
stress R2A with Doxycycline hyclate 0.0001 mg/ml -1.8 N.D. -4.1 +0.2 -0.2
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL -2.3 N.D. -0.8 -0.1 -0.1
stress R2A with Vancomycin 0.5 mg/ml -3.0 N.D. +0.2 -0.0 -0.0
carbon source Heptanoic (C) -2.4 N.D. -0.2 -0.0 -0.1
carbon source Octanoic (C) -1.8 N.D. -0.2 -0.3 -0.3
carbon source Azelaic (C) -2.3 N.D. -0.2 +0.3 -0.3
stress R2A with nitrate 150 mM -1.3 N.D. -0.5 -0.2 -0.3
stress R2A with Sisomicin 0.035 mg/ml -1.7 N.D. -0.4 -0.0 -0.1
stress R2A with Lomefloxacin 0.001 mM -2.5 N.D. +0.3 +0.1 +0.1
carbon source L-Alanine (C) -1.9 N.D. +0.1 +0.0 -0.2
stress R2A with Paraquat dichloride 0.064 mg/ml -2.1 N.D. +0.2 -0.0 +0.1
stress R2A with nitrate 200 mM -0.7 N.D. -0.7 -0.2 -0.2
stress R2A with nitrate 200 mM -1.3 N.D. -0.2 -0.2 -0.1
stress R2A with Nickel (II) chloride 0.5 mM -0.8 N.D. -0.6 -0.2 +0.0
carbon source Heptanoic (C) -1.1 N.D. -0.2 -0.2 -0.1
carbon source Suberic (C) -1.6 N.D. +0.0 +0.1 -0.1
carbon source Protocatechuic Acid (C) -1.8 N.D. -0.1 +0.3 +0.0
carbon source Suberic (C) -1.3 N.D. -0.2 +0.1 -0.2
nitrogen source nitrite (N) -1.4 N.D. -0.1 -0.1 +0.1
stress R2A with Cobalt chloride 0.5 mM -0.9 N.D. -0.6 +0.2 -0.1
carbon source Carbon source D,L-Lactate 10 mM -1.2 N.D. -0.1 -0.1 +0.3
carbon source Carbon source Phenylacetic 2.5 mM -0.9 N.D. -0.4 +0.3 +0.1
carbon source a-Ketoglutaric (C) +1.0 N.D. -0.3 -0.0 -0.4
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate +1.0 N.D. -0.5 +0.2 +0.2
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +1.7 N.D. -0.3 -0.0 -0.5
carbon source adipate (C) +1.5 N.D. -0.4 -0.2 -0.0
stress R2A with D-Cycloserine 0.5 mg/ml +1.7 N.D. -0.0 -0.1 -0.4
stress R2A with Zinc 0.1 mM +1.1 N.D. -0.2 +0.4 +0.0
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +2.1 N.D. -0.4 -0.0 +0.4
stress R2A with copper (II) chloride 0.25 mM +2.4 N.D. -0.0 -0.1 -0.0
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