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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS20360 and RR42_RS20365 are separated by 306 nucleotides
RR42_RS20365 and RR42_RS20370 are separated by 156 nucleotides
RR42_RS20370 and RR42_RS20375 are separated by 144 nucleotides
RR42_RS20375 and RR42_RS20380 are separated by 25 nucleotides
RR42_RS20360: RR42_RS20360 - AsnC family transcriptional regulator, at 4,409,929 to 4,410,408
_RS20360
RR42_RS20365: RR42_RS20365 - phenylalanine-4-hydroxylase, at 4,410,715 to 4,411,647
_RS20365
RR42_RS20370: RR42_RS20370 - pterin-4-alpha-carbinolamine dehydratase, at 4,411,804 to 4,412,121
_RS20370
RR42_RS20375: RR42_RS20375 - transcriptional regulator, at 4,412,266 to 4,412,970
_RS20375
RR42_RS20380: RR42_RS20380 - histidine kinase, at 4,412,996 to 4,414,615
_RS20380
Group
Condition
RR42
_RS20360
RR42
_RS20365
RR42
_RS20370
RR42
_RS20375
RR42
_RS20380
nitrogen source
L-Phenylalanine (N)
-3.5
-4.7
-2.4
-0.0
+0.0
carbon source
Suberic (C)
-1.7
+0.2
-2.2
-3.6
-1.5
carbon source
L-Phenylalanine (C)
-1.3
-5.0
-2.4
+0.5
-0.0
carbon source
Pimelic (C)
+0.7
+0.1
-0.6
-4.7
-2.6
carbon source
Disodium Glutarate (C)
-0.2
+0.2
-0.7
-3.7
-2.4
carbon source
adipate (C)
+0.4
-0.0
-1.4
-3.6
-2.1
carbon source
Pimelic (C)
-0.2
+0.4
+1.0
-4.6
-2.9
carbon source
Disodium Glutarate (C)
-0.7
+0.3
-1.1
-2.7
-2.0
stress
R2A with Cobalt chloride 0.5 mM
-1.3
-0.6
-1.8
-1.7
-0.7
carbon source
adipate (C)
+0.7
+0.2
-0.1
-3.5
-2.8
carbon source
Suberic (C)
-0.4
-0.1
-0.5
-2.7
-1.3
stress
R2A with Nickel (II) chloride 0.5 mM
+0.2
-0.7
-2.9
-0.2
-0.2
stress
R2A with Cobalt chloride 0.3 mM
-0.6
-1.1
-1.2
-0.7
-0.3
carbon source
a-Ketoglutaric (C)
-0.5
+0.1
+0.2
-1.7
-1.8
carbon source
a-Ketoglutaric (C)
-0.0
-0.0
+0.3
-2.1
-1.6
stress
R2A with Nickel (II) chloride 0.25 mM
-0.5
-0.5
-2.0
-0.1
-0.3
carbon source
propionate (C)
-1.1
-0.0
-1.5
+0.1
+0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.0
-0.3
-2.8
+1.1
+0.3
carbon source
Carbon source Phenylacetic 2.5 mM
+0.7
+0.0
-0.9
-1.2
-0.4
carbon source
Protocatechuic Acid (C)
+0.8
-0.3
-1.7
-0.3
-0.2
stress
R2A with Chlorite 4 mM
+0.4
-0.8
-1.3
+0.9
+0.7
stress
R2A with Chlorite 4 mM
+0.5
-1.6
+0.0
+0.9
+0.5
carbon source
L-Tryptophan (C)
+0.2
+0.6
+1.2
-0.3
-0.4
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.4
+1.3
+0.9
-0.4
+0.0
nitrogen source
L-Glutamine (N)
+0.5
-0.5
+1.0
+0.3
+0.6
carbon source
L-Tryptophan (C)
-0.5
+0.8
+1.9
+0.2
-0.0
nitrogen source
L-Valine (N)
+0.7
+0.5
+1.6
+0.2
-0.2
carbon source
L-Histidine (C)
+0.3
+1.2
+1.9
-0.4
-0.2
stress
R2A with Sisomicin 0.035 mg/ml
+0.5
+0.3
+1.6
+0.2
+0.3
carbon source
L-Histidine (C)
+0.4
+1.0
+1.4
+0.3
+0.2
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