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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS19830 and RR42_RS19835 are separated by 357 nucleotides
RR42_RS19835 and RR42_RS19840 are separated by 55 nucleotides
RR42_RS19840 and RR42_RS19845 are separated by 112 nucleotides
RR42_RS19845 and RR42_RS19850 are separated by 364 nucleotides
RR42_RS19830: RR42_RS19830 - LysR family transcriptional regulator, at 4,279,601 to 4,280,539
_RS19830
RR42_RS19835: RR42_RS19835 - MFS transporter, at 4,280,897 to 4,282,210
_RS19835
RR42_RS19840: RR42_RS19840 - amidohydrolase, at 4,282,266 to 4,283,477
_RS19840
RR42_RS19845: RR42_RS19845 - hypothetical protein, at 4,283,590 to 4,284,513
_RS19845
RR42_RS19850: RR42_RS19850 - glyoxylate carboligase, at 4,284,878 to 4,286,653
_RS19850
Group
Condition
RR42
_RS19830
RR42
_RS19835
RR42
_RS19840
RR42
_RS19845
RR42
_RS19850
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-1.1
-0.4
-0.1
+0.5
-3.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-1.3
-0.3
-0.0
+0.2
-1.8
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.1
-0.2
-0.3
+0.0
-2.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.2
-0.0
-0.3
+0.1
-2.2
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-1.0
-0.2
-0.2
+0.0
-0.2
carbon source
adipate (C)
-1.0
+0.0
-0.0
-0.2
-0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
+0.3
-0.0
+0.5
+0.1
-2.1
stress
R2A with Nickel (II) chloride 0.35 mM
+0.3
-0.4
-0.5
-0.2
-0.4
nitrogen source
L-Glutamine (N)
-0.4
-0.3
+0.2
-0.2
-0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.7
-0.3
+0.8
-0.2
-0.4
stress
R2A with Chloride 300 mM
-0.3
-0.1
-0.5
+0.3
+0.1
nitrogen source
L-Tryptophan (N)
-0.9
+0.1
+0.2
-0.1
+0.1
carbon source
Valeric (C)
+0.5
-0.1
-0.2
-0.2
-0.2
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
+0.7
-0.1
+0.2
-0.6
-0.2
carbon source
Protocatechuic Acid (C)
-0.7
+0.3
-0.4
+0.4
+0.2
stress
R2A with Vancomycin 0.5 mg/ml
+0.7
+0.1
-0.5
+0.2
-0.5
carbon source
pyruvate (C)
-0.7
+0.2
+0.4
+0.2
-0.1
stress
R2A with Nickel (II) chloride 0.5 mM
-1.0
+0.0
+0.4
+0.3
+0.3
carbon source
Azelaic (C)
+0.4
-0.4
+0.3
+0.2
-0.4
r2a
R2A
+0.8
+0.1
+0.1
-0.2
-0.2
carbon source
a-Ketoglutaric (C)
+0.5
+0.2
+0.2
-0.1
-0.3
carbon source
L-Malic (C)
-0.1
-0.0
+0.7
+0.3
-0.1
carbon source
butyrate (C)
+0.9
-0.1
+0.1
-0.2
+0.1
stress
R2A with Nickel (II) chloride 0.35 mM
+0.5
+0.2
-0.4
+0.3
+0.2
nitrogen source
D-Alanine (N)
+0.6
-0.2
+0.3
+0.2
-0.1
stress
R2A with D-Cycloserine 0.5 mg/ml
+0.5
-0.1
+0.4
+0.5
-0.1
stress
R2A with nitrate 150 mM
+0.4
+0.1
+0.4
+0.3
+0.1
carbon source
L-Alanine (C)
+0.7
+0.1
+0.2
+0.2
+0.4
carbon source
L-Glutamine (C)
+0.8
+0.1
+0.7
+0.0
+0.1
stress
R2A with Cobalt chloride 0.3 mM
+0.9
-0.0
+0.2
+0.8
+0.1
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RR42_RS19840
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