Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS19005 and RR42_RS19010 overlap by 14 nucleotidesRR42_RS19010 and RR42_RS19015 are separated by 246 nucleotidesRR42_RS19015 and RR42_RS19020 overlap by 4 nucleotidesRR42_RS19020 and RR42_RS19025 overlap by 4 nucleotides RR42_RS19005: RR42_RS19005 - 3-dehydroquinate synthase, at 4,116,964 to 4,118,070 _RS19005 RR42_RS19010: RR42_RS19010 - shikimate kinase, at 4,118,057 to 4,118,671 _RS19010 RR42_RS19015: RR42_RS19015 - secretin, at 4,118,918 to 4,121,092 _RS19015 RR42_RS19020: RR42_RS19020 - pilus assembly protein PilP, at 4,121,089 to 4,121,622 _RS19020 RR42_RS19025: RR42_RS19025 - pilus assembly protein PilO, at 4,121,619 to 4,122,299 _RS19025
Group Condition RR42_RS19005 RR42_RS19010 RR42_RS19015 RR42_RS19020 RR42_RS19025
carbon source D-Gluconic Acid (C) -6.0 -4.7 +0.1 -0.1 -0.5
carbon source 4-Hydroxybenzoic Acid (C) -5.8 -4.9 -0.2 -0.1 -0.1
carbon source Carbon source Phenylacetic 2.5 mM -6.5 -4.8 +0.1 +0.2 +0.1
nitrogen source nitrite (N) -6.4 -4.3 +0.0 +0.0 -0.1
carbon source succinate (C) -5.9 -4.6 -0.1 +0.2 -0.2
nitrogen source L-Threonine (N) -5.6 -4.8 -0.1 +0.1 -0.2
nitrogen source L-Tryptophan (N) -6.4 -3.8 +0.0 -0.0 -0.4
carbon source L-Lactate (C) -5.9 -4.7 +0.1 +0.2 -0.1
carbon source pyruvate (C) -5.8 -4.9 +0.1 +0.1 +0.3
carbon source a-Ketoglutaric (C) -6.0 -4.1 -0.0 -0.0 -0.1
carbon source succinate (C) -5.3 -4.9 +0.1 -0.0 +0.0
nitrogen source D-Alanine (N) -6.3 -4.1 +0.0 +0.1 +0.1
carbon source Azelaic (C) -5.8 -3.9 -0.1 -0.1 -0.1
carbon source L-Threonine (C) -5.8 -4.5 +0.1 +0.1 +0.2
carbon source D-Lactate (C) -5.1 -4.7 +0.0 +0.0 +0.0
carbon source L-Asparagine (C) -5.7 -4.4 +0.1 +0.1 +0.1
nitrogen source L-Tryptophan (N) -6.0 -4.0 -0.0 +0.1 +0.0
carbon source Carbon source Phenylacetic 2.5 mM -5.7 -4.1 +0.0 +0.0 -0.0
carbon source Carbon source D,L-Lactate 10 mM -5.3 -4.3 -0.1 +0.1 -0.0
nitrogen source L-Leucine (N) -6.3 -3.5 -0.0 -0.1 +0.4
carbon source L-Lactate (C) -5.4 -4.4 +0.0 +0.2 -0.1
nitrogen source L-Glutamine (N) -5.4 -4.5 +0.2 -0.1 +0.2
carbon source L-Malic (C) -5.3 -4.3 -0.1 +0.0 +0.2
carbon source pyruvate (C) -4.7 -4.6 +0.1 +0.1 -0.3
carbon source Dodecandioic (C) -5.8 -3.9 +0.2 +0.0 +0.1
carbon source 4-Hydroxybenzoic Acid (C) -5.6 -4.0 +0.1 +0.1 +0.1
carbon source D-Lactate (C) -5.4 -4.2 +0.2 +0.1 +0.0
carbon source Octanoic (C) -5.6 -3.8 +0.1 -0.1 +0.1
carbon source D,L-Lactate (C) -4.8 -4.7 +0.1 +0.2 -0.0
carbon source L-Proline (C) -6.2 -3.2 -0.1 +0.3 +0.1
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