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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS18170 and RR42_RS18175 are separated by 8 nucleotides
RR42_RS18175 and RR42_RS18180 are separated by 5 nucleotides
RR42_RS18180 and RR42_RS18185 are separated by 313 nucleotides
RR42_RS18185 and RR42_RS18190 are separated by 54 nucleotides
RR42_RS18170: RR42_RS18170 - amino acid ABC transporter substrate-binding protein, at 3,934,992 to 3,936,266
_RS18170
RR42_RS18175: RR42_RS18175 - aminopeptidase, at 3,936,275 to 3,937,468
_RS18175
RR42_RS18180: RR42_RS18180 - molybdopterin oxidoreductase, at 3,937,474 to 3,939,576
_RS18180
RR42_RS18185: RR42_RS18185 - ABC transporter permease, at 3,939,890 to 3,941,059
_RS18185
RR42_RS18190: RR42_RS18190 - peptide ABC transporter ATP-binding protein, at 3,941,114 to 3,942,178
_RS18190
Group
Condition
RR42
_RS18170
RR42
_RS18175
RR42
_RS18180
RR42
_RS18185
RR42
_RS18190
nitrogen source
L-Serine (N)
-0.2
-0.3
-0.1
-0.2
-0.5
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.0
-0.2
-0.1
-0.1
-0.7
temperature
R2A 23C
-0.0
-0.2
-0.2
-0.0
-0.4
stress
R2A with Nickel (II) chloride 0.35 mM
-0.1
-0.1
-0.2
-0.0
-0.4
nitrogen source
casaminos (N)
-0.0
-0.3
-0.2
-0.1
-0.3
stress
R2A with Dimethyl Sulfoxide 5 vol%
-0.2
-0.2
-0.1
-0.2
-0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
+0.0
-0.3
+0.0
-0.5
stress
R2A with Paraquat dichloride 0.064 mg/ml
+0.0
-0.3
-0.1
-0.3
-0.1
nitrogen source
L-Glutamine (N)
-0.5
+0.0
+0.1
-0.2
-0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.5
+0.2
-0.1
-0.1
-0.2
carbon source
Pimelic (C)
-0.2
-0.2
+0.1
-0.1
-0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.6
+0.0
-0.1
+0.5
-0.3
carbon source
Dodecandioic (C)
-0.2
+0.2
+0.1
-0.1
-0.4
stress
R2A with copper (II) chloride 0.25 mM
-0.1
-0.1
+0.1
+0.1
-0.4
stress
R2A with Lomefloxacin 0.001 mM
+0.1
-0.2
+0.1
-0.1
-0.3
stress
R2A with Cobalt chloride 0.5 mM
-0.3
-0.1
-0.5
+0.0
+0.6
carbon source
Heptanoic (C)
-0.2
+0.1
+0.4
-0.2
-0.2
carbon source
Suberic (C)
+0.2
+0.1
+0.2
-0.2
-0.4
carbon source
Carbon source Phenylacetic 2.5 mM
+0.1
+0.1
-0.1
+0.3
-0.3
carbon source
adipate (C)
+0.1
+0.0
+0.3
-0.1
-0.2
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
-0.1
-0.1
+0.3
+0.2
-0.2
lb
LB
-0.2
+0.0
-0.2
+0.1
+0.4
carbon source
Protocatechuic Acid (C)
-0.2
-0.2
+0.3
+0.1
+0.2
carbon source
Carbon source D,L-Lactate 10 mM
+0.1
+0.2
-0.0
+0.2
-0.3
carbon source
pyruvate (C)
+0.3
-0.0
-0.0
+0.4
-0.3
stress
R2A with sodium fluoride 100 mM
+0.3
+0.1
+0.1
+0.2
-0.2
stress
R2A with nitrate 200 mM
+0.3
+0.1
+0.1
+0.1
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.1
-0.1
-0.1
+0.2
+0.4
carbon source
4-Hydroxybenzoic Acid (C)
+0.2
+0.2
+0.1
+0.3
-0.0
stress
R2A with Nickel (II) chloride 0.25 mM
+0.3
+0.2
+0.2
-0.2
+0.2
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RR42_RS18180
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