Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS17910 and RR42_RS17915 overlap by 1 nucleotidesRR42_RS17915 and RR42_RS17920 overlap by 4 nucleotidesRR42_RS17920 and RR42_RS17925 are separated by 23 nucleotidesRR42_RS17925 and RR42_RS17930 are separated by 185 nucleotides RR42_RS17910: RR42_RS17910 - AraC family transcriptional regulator, at 3,875,912 to 3,876,751 _RS17910 RR42_RS17915: RR42_RS17915 - proline dioxygenase, at 3,876,751 to 3,877,701 _RS17915 RR42_RS17920: RR42_RS17920 - lytic transglycosylase, at 3,877,698 to 3,878,444 _RS17920 RR42_RS17925: RR42_RS17925 - prolyl-tRNA synthetase, at 3,878,468 to 3,880,189 _RS17925 RR42_RS17930: RR42_RS17930 - RNA pyrophosphohydrolase, at 3,880,375 to 3,881,037 _RS17930
Group Condition RR42_RS17910 RR42_RS17915 RR42_RS17920 RR42_RS17925 RR42_RS17930
carbon source Pimelic (C) +0.2 -0.1 -0.4 N.D. -3.4
carbon source Pimelic (C) -0.2 -0.0 -0.5 N.D. -2.3
carbon source Suberic (C) -0.0 -0.1 -0.4 N.D. -2.4
carbon source Suberic (C) -0.0 -0.1 -0.3 N.D. -2.3
carbon source adipate (C) +0.2 -0.0 -0.5 N.D. -2.2
carbon source Disodium Glutarate (C) -0.0 -0.1 -0.3 N.D. -2.1
carbon source Azelaic (C) -0.2 +0.2 -0.6 N.D. -1.8
carbon source Octanoic (C) -0.0 +0.2 -0.9 N.D. -1.4
carbon source adipate (C) -0.2 +0.4 -0.4 N.D. -2.0
carbon source Azelaic (C) -0.1 +0.1 -0.4 N.D. -1.6
carbon source L-Proline (C) +0.4 -0.2 -0.4 N.D. -1.6
carbon source a-Ketoglutaric (C) +0.2 +0.1 -0.1 N.D. -1.5
stress R2A with Chloride 300 mM +0.2 +0.1 +0.2 N.D. -1.4
stress R2A with copper (II) chloride 0.25 mM +0.3 +0.2 -0.9 N.D. -0.5
stress R2A with Lomefloxacin 0.001 mM -0.2 +0.0 -0.5 N.D. +1.7
carbon source Protocatechuic Acid (C) -0.2 +0.1 -0.9 N.D. +2.4
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.2 -0.1 +0.3 N.D. +1.6
stress R2A with Nickel (II) chloride 0.35 mM +0.0 +0.1 +0.5 N.D. +1.3
stress R2A with D-Cycloserine 0.5 mg/ml +0.1 +0.2 -0.2 N.D. +1.9
stress R2A with Cobalt chloride 0.3 mM -0.1 +0.1 +0.4 N.D. +1.6
lb LB +0.1 +0.4 +0.6 N.D. +0.9
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL +0.0 -0.2 +0.7 N.D. +1.7
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.1 -0.1 +0.0 N.D. +2.8
carbon source Protocatechuic Acid (C) +0.0 +0.0 -0.4 N.D. +3.1
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.3 +0.0 +0.3 N.D. +2.5
stress R2A with Cobalt chloride 0.5 mM +0.3 +0.1 +0.2 N.D. +3.1
stress R2A with Vancomycin 0.5 mg/ml -0.0 +0.1 +4.6 N.D. -0.7
stress R2A with Vancomycin 0.5 mg/ml -0.2 -0.1 +5.3 N.D. -1.0
stress R2A with Nickel (II) chloride 0.35 mM +0.2 +0.1 +0.0 N.D. +5.3
stress R2A with Nickel (II) chloride 0.5 mM +0.2 +0.4 +0.5 N.D. +4.7
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