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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS17690 and RR42_RS17695 are separated by 158 nucleotides
RR42_RS17695 and RR42_RS17700 are separated by 183 nucleotides
RR42_RS17700 and RR42_RS17705 are separated by 43 nucleotides
RR42_RS17705 and RR42_RS17710 are separated by 9 nucleotides
RR42_RS17690: RR42_RS17690 - 3-dehydroquinate dehydratase, at 3,827,533 to 3,827,982
_RS17690
RR42_RS17695: RR42_RS17695 - acetyl-CoA carboxylase, at 3,828,141 to 3,828,599
_RS17695
RR42_RS17700: RR42_RS17700 - acetyl-CoA carboxylase, at 3,828,783 to 3,830,150
_RS17700
RR42_RS17705: RR42_RS17705 - ribosomal protein L11 methyltransferase, at 3,830,194 to 3,831,108
_RS17705
RR42_RS17710: RR42_RS17710 - hypothetical protein, at 3,831,118 to 3,832,671
_RS17710
Group
Condition
RR42
_RS17690
RR42
_RS17695
RR42
_RS17700
RR42
_RS17705
RR42
_RS17710
stress
R2A with Nickel (II) chloride 0.5 mM
-3.1
N.D.
N.D.
+0.1
+0.1
stress
R2A with Nickel (II) chloride 0.35 mM
-2.6
N.D.
N.D.
+0.0
+0.2
nitrogen source
L-Lysine (N)
-2.2
N.D.
N.D.
-0.0
-0.0
carbon source
D-Gluconic Acid (C)
-2.3
N.D.
N.D.
+0.2
+0.1
stress
R2A with Cobalt chloride 0.5 mM
-1.5
N.D.
N.D.
-0.2
-0.2
nitrogen source
nitrate (N)
-1.9
N.D.
N.D.
+0.2
-0.0
stress
R2A with Nickel (II) chloride 0.35 mM
-0.9
N.D.
N.D.
-0.6
-0.1
stress
R2A with nitrate 150 mM
-0.7
N.D.
N.D.
-0.4
-0.1
stress
R2A with Cobalt chloride 0.3 mM
-0.9
N.D.
N.D.
+0.1
-0.3
stress
R2A with Chloride 300 mM
-0.5
N.D.
N.D.
-0.4
-0.2
stress
R2A with Vancomycin 0.5 mg/ml
-0.6
N.D.
N.D.
-0.1
-0.3
carbon source
pyruvate (C)
-0.7
N.D.
N.D.
-0.2
-0.0
nitrogen source
L-Citrulline (N)
-1.0
N.D.
N.D.
+0.3
-0.2
stress
R2A with sodium fluoride 100 mM
-0.8
N.D.
N.D.
-0.0
-0.1
carbon source
Protocatechuic Acid (C)
-0.9
N.D.
N.D.
+0.0
+0.0
lb
LB
-0.4
N.D.
N.D.
-0.1
-0.3
carbon source
Protocatechuic Acid (C)
-0.9
N.D.
N.D.
-0.1
+0.3
stress
R2A with Cisplatin 0.001 mg/ml
-0.9
N.D.
N.D.
+0.3
-0.1
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-1.0
N.D.
N.D.
+0.3
-0.1
stress
R2A with Chlorite 4 mM
-0.6
N.D.
N.D.
+0.1
-0.3
stress
R2A with Sisomicin 0.035 mg/ml
+0.1
N.D.
N.D.
-0.5
-0.3
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.6
N.D.
N.D.
-0.2
+0.2
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-0.3
N.D.
N.D.
+0.2
-0.5
carbon source
L-Histidine (C)
-0.4
N.D.
N.D.
+0.2
-0.3
stress
R2A with Zinc 0.1 mM
+0.3
N.D.
N.D.
-0.4
-0.3
carbon source
4-Hydroxybenzoic Acid (C)
-0.9
N.D.
N.D.
+0.3
+0.2
stress
R2A with Lomefloxacin 0.001 mM
-0.6
N.D.
N.D.
+0.1
+0.2
carbon source
a-Ketoglutaric (C)
-0.6
N.D.
N.D.
+0.3
-0.1
stress
R2A with Cisplatin 0.001 mg/ml
-0.3
N.D.
N.D.
+0.3
-0.2
nitrogen source
L-Leucine (N)
-0.5
N.D.
N.D.
+0.2
+0.2
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RR42_RS17700
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