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Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS17245 and RR42_RS17250 are separated by 212 nucleotides
RR42_RS17250 and RR42_RS17255 are separated by 13 nucleotides
RR42_RS17255 and RR42_RS17260 are separated by 53 nucleotides
RR42_RS17260 and RR42_RS17265 are separated by 9 nucleotides
RR42_RS17245: RR42_RS17245 - deoxynucleoside kinase, at 3,733,259 to 3,733,900
_RS17245
RR42_RS17250: RR42_RS17250 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 3,734,113 to 3,734,934
_RS17250
RR42_RS17255: RR42_RS17255 - ABC transporter permease, at 3,734,948 to 3,735,646
_RS17255
RR42_RS17260: RR42_RS17260 - ABC transporter ATP-binding protein, at 3,735,700 to 3,736,374
_RS17260
RR42_RS17265: RR42_RS17265 - aminodeoxychorismate synthase, at 3,736,384 to 3,738,147
_RS17265
Group
Condition
RR42
_RS17245
RR42
_RS17250
RR42
_RS17255
RR42
_RS17260
RR42
_RS17265
nitrogen source
D-Alanine (N)
+0.2
N.D.
-0.5
-1.3
-0.1
carbon source
Dodecandioic (C)
-0.5
N.D.
-0.7
-0.2
-0.0
carbon source
Azelaic (C)
-0.3
N.D.
-0.8
-0.1
+0.0
nitrogen source
L-Valine (N)
-0.3
N.D.
-0.4
-0.5
-0.0
carbon source
L-Proline (C)
-0.1
N.D.
-0.3
-0.7
-0.2
carbon source
L-Asparagine (C)
+0.0
N.D.
-0.3
-0.8
+0.1
nitrogen source
L-Isoleucine (N)
+0.2
N.D.
-0.5
-0.6
+0.0
stress
R2A with Dimethyl Sulfoxide 5 vol%
-0.2
N.D.
-0.4
-0.5
+0.1
temperature
R2A 23C
-0.0
N.D.
-0.4
-0.5
+0.1
carbon source
Protocatechuic Acid (C)
-0.4
N.D.
+0.3
-0.4
-0.2
nitrogen source
L-Glutamine (N)
+0.2
N.D.
+0.0
-0.1
-0.7
carbon source
a-Ketoglutaric (C)
-0.1
N.D.
-0.6
+0.3
-0.0
carbon source
adipate (C)
-0.1
N.D.
+0.4
-0.7
+0.1
carbon source
a-Ketoglutaric (C)
-0.5
N.D.
+0.2
-0.2
+0.2
stress
R2A with Chlorite 4 mM
+0.1
N.D.
+0.4
-0.3
-0.3
stress
R2A with Nickel (II) chloride 0.35 mM
-0.4
N.D.
+0.4
-0.4
+0.4
stress
R2A with Cobalt chloride 0.5 mM
-0.3
N.D.
+0.5
-0.2
-0.1
stress
R2A with Cisplatin 0.001 mg/ml
-0.5
N.D.
+0.3
+0.6
-0.3
stress
R2A with Lomefloxacin 0.001 mM
-0.1
N.D.
+0.7
-0.3
-0.0
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.4
N.D.
+0.6
+0.5
-0.2
stress
R2A with Zinc 0.1 mM
-0.2
N.D.
+0.4
+0.4
+0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.2
N.D.
+0.3
+0.5
-0.2
carbon source
D-Gluconic Acid (C)
+0.2
N.D.
+0.4
+0.5
+0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.3
N.D.
+0.8
+0.7
+0.1
carbon source
Trisodium citrate (C)
-0.0
N.D.
+0.7
+0.5
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.4
N.D.
+0.8
+1.1
-0.2
lb
LB
-0.1
N.D.
+0.7
+0.7
+0.2
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
N.D.
+0.4
+0.8
+0.0
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
+0.0
N.D.
+0.6
+1.2
-0.3
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.2
N.D.
+1.2
+0.6
+0.0
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