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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS17150 and RR42_RS17155 are separated by 51 nucleotides
RR42_RS17155 and RR42_RS17160 are separated by 140 nucleotides
RR42_RS17160 and RR42_RS17165 are separated by 19 nucleotides
RR42_RS17165 and RR42_RS17170 are separated by 117 nucleotides
RR42_RS17150: RR42_RS17150 - hypothetical protein, at 3,714,445 to 3,714,894
_RS17150
RR42_RS17155: RR42_RS17155 - nucleotide-binding protein, at 3,714,946 to 3,715,431
_RS17155
RR42_RS17160: RR42_RS17160 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 3,715,572 to 3,716,588
_RS17160
RR42_RS17165: RR42_RS17165 - hypothetical protein, at 3,716,608 to 3,716,919
_RS17165
RR42_RS17170: RR42_RS17170 - argininosuccinate synthase, at 3,717,037 to 3,718,266
_RS17170
Group
Condition
RR42
_RS17150
RR42
_RS17155
RR42
_RS17160
RR42
_RS17165
RR42
_RS17170
stress
R2A with Paraquat dichloride 0.064 mg/ml
-0.8
N.D.
N.D.
-1.1
N.D.
stress
R2A with Cobalt chloride 0.5 mM
-1.1
N.D.
N.D.
-0.8
N.D.
stress
R2A with Lomefloxacin 0.00075 mM
-0.3
N.D.
N.D.
-0.9
N.D.
stress
R2A with A22 0.01 mg/ml
-0.6
N.D.
N.D.
-0.4
N.D.
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-1.2
N.D.
N.D.
+0.2
N.D.
stress
R2A with copper (II) chloride 0.25 mM
-1.3
N.D.
N.D.
+0.3
N.D.
stress
R2A with Sisomicin 0.035 mg/ml
-0.6
N.D.
N.D.
-0.3
N.D.
stress
R2A with Nickel (II) chloride 0.35 mM
-0.3
N.D.
N.D.
-0.6
N.D.
stress
R2A with Zinc 0.1 mM
-0.8
N.D.
N.D.
-0.0
N.D.
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
-0.7
N.D.
N.D.
-0.2
N.D.
carbon source
Valeric (C)
+0.2
N.D.
N.D.
-1.1
N.D.
carbon source
Carbon source D,L-Lactate 10 mM
+0.3
N.D.
N.D.
-1.0
N.D.
stress
R2A with Chlorite 4 mM
+0.2
N.D.
N.D.
-0.7
N.D.
carbon source
Dodecandioic (C)
+0.2
N.D.
N.D.
-0.7
N.D.
carbon source
Hexanoic (C)
+0.2
N.D.
N.D.
-0.6
N.D.
carbon source
Azelaic (C)
+0.4
N.D.
N.D.
-0.7
N.D.
carbon source
Carbon source Phenylacetic 2.5 mM
+0.5
N.D.
N.D.
-0.7
N.D.
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.5
N.D.
N.D.
+0.3
N.D.
nitrogen source
L-Glutamine (N)
+0.4
N.D.
N.D.
-0.5
N.D.
carbon source
L-Proline (C)
-0.5
N.D.
N.D.
+0.4
N.D.
carbon source
Azelaic (C)
+0.5
N.D.
N.D.
-0.5
N.D.
carbon source
succinate (C)
-0.4
N.D.
N.D.
+0.6
N.D.
nitrogen source
L-Threonine (N)
-0.3
N.D.
N.D.
+0.5
N.D.
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.4
N.D.
N.D.
+0.7
N.D.
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
-0.4
N.D.
N.D.
+0.8
N.D.
carbon source
D-Lactate (C)
-0.1
N.D.
N.D.
+0.8
N.D.
stress
R2A with Cobalt chloride 0.3 mM
-0.5
N.D.
N.D.
+1.2
N.D.
stress
R2A with D-Cycloserine 0.5 mg/ml
+0.7
N.D.
N.D.
+0.2
N.D.
carbon source
Trisodium citrate (C)
+0.0
N.D.
N.D.
+0.9
N.D.
stress
R2A with Vancomycin 0.5 mg/ml
+0.3
N.D.
N.D.
+0.9
N.D.
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