Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS16930 and RR42_RS16935 overlap by 4 nucleotidesRR42_RS16935 and RR42_RS16940 are separated by 13 nucleotidesRR42_RS16940 and RR42_RS16945 are separated by 466 nucleotidesRR42_RS16945 and RR42_RS16950 are separated by 9 nucleotides RR42_RS16930: RR42_RS16930 - sulfonate ABC transporter ATP-binding protein, at 3,664,590 to 3,665,369 _RS16930 RR42_RS16935: RR42_RS16935 - ABC transporter permease, at 3,665,366 to 3,666,238 _RS16935 RR42_RS16940: RR42_RS16940 - ABC transporter permease, at 3,666,252 to 3,667,223 _RS16940 RR42_RS16945: RR42_RS16945 - NAD-dependent dehydratase, at 3,667,690 to 3,668,670 _RS16945 RR42_RS16950: RR42_RS16950 - CDP-6-deoxy-delta-3,4-glucoseen reductase, at 3,668,680 to 3,669,744 _RS16950
Group Condition RR42_RS16930 RR42_RS16935 RR42_RS16940 RR42_RS16945 RR42_RS16950
stress R2A with Doxycycline hyclate 0.0001 mg/ml -0.8 +0.1 +0.0 +0.1 -3.5
nitrogen source L-Serine (N) -1.1 -0.6 -0.5 -0.9 -1.0
stress R2A with Lomefloxacin 0.00075 mM -0.8 +0.0 -1.0 -0.3 -1.8
nitrogen source nitrite (N) +0.1 -0.1 -0.1 -2.9 -0.7
nitrogen source Glucuronamide (N) -1.0 -0.3 -0.5 -0.9 -1.0
nitrogen source L-Glutamine (N) -1.1 -0.9 -0.5 -0.7 -0.0
nitrogen source nitrate (N) -0.6 -0.2 +0.1 -1.8 -0.5
carbon source Heptanoic (C) -0.7 -0.0 -0.3 -0.4 -1.1
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.2 -0.3 -0.6 -0.9 -0.7
r2a R2A +0.2 -0.2 -0.4 -0.5 -1.0
carbon source L-Phenylalanine (C) -0.4 -0.0 +0.2 -0.9 -0.7
stress R2A with Vancomycin 0.5 mg/ml +0.5 -0.2 -0.1 -0.1 -1.9
stress R2A with Chlorite 4 mM -0.5 -0.3 -0.1 +0.5 -1.4
nitrogen source L-Phenylalanine (N) +0.4 -0.3 +0.1 -0.9 -1.0
carbon source Suberic (C) -1.0 -0.1 +0.3 -0.5 -0.3
temperature R2A 23C +0.4 -0.3 -0.4 -0.5 -0.8
stress R2A with Cobalt chloride 0.5 mM +1.0 +0.1 -0.6 +0.2 -2.2
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -1.3 -0.2 +0.5 -0.7 +0.3
stress R2A with Vancomycin 0.5 mg/ml +0.5 -0.1 +0.5 +0.3 -2.3
carbon source Ethanol (C) -0.7 -0.0 +0.2 +0.3 -0.9
carbon source pyruvate (C) -1.2 +0.2 +0.4 -0.3 -0.2
carbon source D-Fructose (C) +0.3 +0.3 +0.2 -0.3 -0.9
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate +0.7 +0.2 -0.3 +0.4 -0.5
stress R2A with Chlorite 4 mM +0.4 -0.0 +0.1 +0.9 -0.8
stress R2A with Nickel (II) chloride 0.35 mM -0.2 -0.2 -0.1 -0.4 +1.6
carbon source Protocatechuic Acid (C) +1.1 -0.0 -0.2 -0.7 +1.5
stress R2A with Nickel (II) chloride 0.35 mM +0.3 -0.2 +0.3 +0.2 +1.3
stress R2A with Nickel (II) chloride 0.5 mM +0.0 +0.5 +0.3 +0.3 +0.9
lb LB +0.6 +0.4 -0.1 -0.8 +2.3
stress R2A with D-Cycloserine 0.5 mg/ml +1.0 -0.0 +0.1 +0.3 +2.5
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