Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS16865 and RR42_RS16870 overlap by 4 nucleotidesRR42_RS16870 and RR42_RS16875 are separated by 17 nucleotidesRR42_RS16875 and RR42_RS16880 are separated by 3 nucleotidesRR42_RS16880 and RR42_RS16885 are separated by 60 nucleotides RR42_RS16865: RR42_RS16865 - general secretion pathway protein GspH, at 3,648,184 to 3,648,672 _RS16865 RR42_RS16870: RR42_RS16870 - pilus assembly protein, at 3,648,669 to 3,649,259 _RS16870 RR42_RS16875: RR42_RS16875 - type 4 fimbrial biogenesis PilW transmembrane, at 3,649,277 to 3,650,290 _RS16875 RR42_RS16880: RR42_RS16880 - pilus assembly protein, at 3,650,294 to 3,650,836 _RS16880 RR42_RS16885: RR42_RS16885 - type 4 fimbrial biogenesis PilY1 signal peptide, at 3,650,897 to 3,654,112 _RS16885
Group Condition RR42_RS16865 RR42_RS16870 RR42_RS16875 RR42_RS16880 RR42_RS16885
stress R2A with Dimethyl Sulfoxide 5 vol% -0.4 -0.4 -0.4 N.D. -0.3
r2a R2A -0.2 -0.4 -0.3 N.D. -0.3
nitrogen source casaminos (N) -0.4 -0.0 -0.2 N.D. -0.3
stress R2A with Lomefloxacin 0.00075 mM -0.6 +0.0 -0.2 N.D. -0.1
carbon source Carbon source D,L-Lactate 10 mM -0.2 -0.5 -0.2 N.D. +0.1
stress R2A with Cephalothin 0.25 mg/ml -0.2 -0.1 -0.3 N.D. -0.2
temperature R2A 23C -0.3 +0.0 -0.3 N.D. -0.2
nitrogen source L-Serine (N) -0.0 -0.1 -0.3 N.D. -0.3
nitrogen source Glucuronamide (N) -0.2 +0.0 -0.3 N.D. -0.3
carbon source Valeric (C) -0.5 -0.3 +0.1 N.D. +0.1
carbon source D,L-Lactate (C) -0.3 -0.3 -0.1 N.D. +0.1
carbon source Protocatechuic Acid (C) -0.5 +0.0 -0.2 N.D. +0.1
nitrogen source L-Glutamine (N) +0.1 -0.2 -0.4 N.D. +0.0
stress R2A with Cisplatin 0.001 mg/ml +0.1 -0.8 +0.1 N.D. +0.1
stress R2A with Thallium(I) acetate 0.001 mg/ml -0.5 +0.2 +0.0 N.D. -0.0
stress R2A with Lomefloxacin 0.001 mM -0.2 -0.3 +0.3 N.D. -0.1
stress R2A with nitrate 200 mM +0.3 -0.5 -0.0 N.D. -0.1
stress R2A with Doxycycline hyclate 0.0001 mg/ml +0.3 -0.4 -0.0 N.D. -0.0
carbon source L-Malic (C) -0.3 +0.2 -0.2 N.D. +0.1
nitrogen source nitrate (N) -0.2 +0.3 -0.2 N.D. +0.0
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.0 +0.4 -0.2 N.D. -0.2
nitrogen source L-Phenylalanine (N) -0.4 +0.2 +0.2 N.D. -0.0
carbon source 4-Hydroxybenzoic Acid (C) -0.4 +0.2 +0.1 N.D. +0.1
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.1 +0.5 -0.1 N.D. -0.3
lb LB +0.5 -0.4 -0.2 N.D. +0.3
carbon source Suberic (C) +0.1 +0.3 -0.2 N.D. +0.1
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.1 +0.5 -0.2 N.D. -0.1
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.3 +0.4 -0.2 N.D. +0.1
stress R2A with Nickel (II) chloride 0.5 mM +0.5 -0.2 +0.1 N.D. +0.3
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM +0.2 +0.2 +0.3 N.D. +0.1
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