Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS16860 and RR42_RS16865 are separated by 3 nucleotidesRR42_RS16865 and RR42_RS16870 overlap by 4 nucleotidesRR42_RS16870 and RR42_RS16875 are separated by 17 nucleotidesRR42_RS16875 and RR42_RS16880 are separated by 3 nucleotides RR42_RS16860: RR42_RS16860 - pilus assembly protein PilE, at 3,647,752 to 3,648,180 _RS16860 RR42_RS16865: RR42_RS16865 - general secretion pathway protein GspH, at 3,648,184 to 3,648,672 _RS16865 RR42_RS16870: RR42_RS16870 - pilus assembly protein, at 3,648,669 to 3,649,259 _RS16870 RR42_RS16875: RR42_RS16875 - type 4 fimbrial biogenesis PilW transmembrane, at 3,649,277 to 3,650,290 _RS16875 RR42_RS16880: RR42_RS16880 - pilus assembly protein, at 3,650,294 to 3,650,836 _RS16880
Group Condition RR42_RS16860 RR42_RS16865 RR42_RS16870 RR42_RS16875 RR42_RS16880
carbon source Carbon source D,L-Lactate 10 mM -0.3 -0.2 -0.5 -0.2 N.D.
stress R2A with Dimethyl Sulfoxide 5 vol% +0.1 -0.4 -0.4 -0.4 N.D.
stress R2A with Lomefloxacin 0.00075 mM -0.2 -0.6 +0.0 -0.2 N.D.
r2a R2A -0.0 -0.2 -0.4 -0.3 N.D.
carbon source Valeric (C) -0.2 -0.5 -0.3 +0.1 N.D.
carbon source Carbon source Phenylacetic 2.5 mM -0.3 -0.1 -0.2 -0.2 N.D.
nitrogen source Glucuronamide (N) -0.4 -0.2 +0.0 -0.3 N.D.
carbon source Octanoic (C) -0.3 -0.1 +0.1 -0.4 N.D.
stress R2A with Thallium(I) acetate 0.001 mg/ml -0.3 -0.5 +0.2 +0.0 N.D.
stress R2A with Cisplatin 0.001 mg/ml -0.0 +0.1 -0.8 +0.1 N.D.
nitrogen source L-Valine (N) -0.4 -0.3 +0.2 -0.1 N.D.
nitrogen source L-Citrulline (N) -0.3 -0.2 +0.1 -0.2 N.D.
carbon source Protocatechuic Acid (C) +0.1 -0.5 +0.0 -0.2 N.D.
stress R2A with nitrate 200 mM -0.3 +0.3 -0.5 -0.0 N.D.
carbon source Protocatechuic Acid (C) -0.2 -0.3 -0.1 +0.2 N.D.
carbon source L-Malic (C) -0.1 -0.3 +0.2 -0.2 N.D.
stress R2A with Lomefloxacin 0.001 mM +0.0 -0.2 -0.3 +0.3 N.D.
stress R2A with Cobalt chloride 0.3 mM -0.2 -0.3 +0.1 +0.2 N.D.
stress R2A with Doxycycline hyclate 0.0001 mg/ml +0.1 +0.3 -0.4 -0.0 N.D.
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.3 -0.0 +0.4 -0.2 N.D.
nitrogen source L-Phenylalanine (N) +0.1 -0.4 +0.2 +0.2 N.D.
nitrogen source nitrate (N) +0.2 -0.2 +0.3 -0.2 N.D.
carbon source Heptanoic (C) -0.2 +0.3 -0.1 +0.2 N.D.
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.2 -0.1 +0.5 -0.1 N.D.
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.2 +0.3 +0.4 -0.2 N.D.
lb LB +0.6 +0.5 -0.4 -0.2 N.D.
nitrogen source Glycine (N) -0.2 +0.2 +0.4 +0.1 N.D.
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.3 +0.1 +0.5 -0.2 N.D.
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM +0.2 +0.2 +0.2 +0.3 N.D.
stress R2A with Nickel (II) chloride 0.5 mM +0.6 +0.5 -0.2 +0.1 N.D.
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