Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS15880 and RR42_RS15885 are separated by 184 nucleotidesRR42_RS15885 and RR42_RS15890 are separated by 365 nucleotidesRR42_RS15890 and RR42_RS15895 are separated by 3 nucleotidesRR42_RS15895 and RR42_RS15900 are separated by 9 nucleotides RR42_RS15880: RR42_RS15880 - pseudouridine synthase, at 3,431,562 to 3,432,275 _RS15880 RR42_RS15885: RR42_RS15885 - deoxyribodipyrimidine photolyase, at 3,432,460 to 3,434,010 _RS15885 RR42_RS15890: RR42_RS15890 - heme biosynthesis protein HemY, at 3,434,376 to 3,435,566 _RS15890 RR42_RS15895: RR42_RS15895 - uroporphyrinogen III methyltransferase, at 3,435,570 to 3,437,732 _RS15895 RR42_RS15900: RR42_RS15900 - porphobilinogen deaminase, at 3,437,742 to 3,438,743 _RS15900
Group Condition RR42_RS15880 RR42_RS15885 RR42_RS15890 RR42_RS15895 RR42_RS15900
nitrogen source L-Leucine (N) -0.2 +0.2 -5.7 -4.2 N.D.
carbon source Heptanoic (C) -0.2 +0.1 -4.3 -3.7 N.D.
carbon source Heptanoic (C) -0.2 -0.0 -4.5 -3.2 N.D.
nitrogen source L-Lysine (N) +0.2 +0.0 -4.9 -3.3 N.D.
nitrogen source L-Leucine (N) +0.1 -0.1 -4.6 -3.3 N.D.
nitrogen source nitrite (N) -0.1 -0.0 -4.4 -3.3 N.D.
nitrogen source L-Tryptophan (N) -0.2 +0.1 -4.5 -3.2 N.D.
nitrogen source nitrate (N) -0.1 -0.1 -4.8 -2.8 N.D.
nitrogen source L-Tryptophan (N) -0.1 -0.2 -4.3 -3.1 N.D.
nitrogen source L-Valine (N) +0.1 +0.1 -4.9 -3.0 N.D.
stress R2A with Cobalt chloride 0.5 mM -0.5 -0.2 -3.5 -3.3 N.D.
stress R2A with Nickel (II) chloride 0.5 mM +0.6 +0.8 -5.8 -3.0 N.D.
stress R2A with Nickel (II) chloride 0.35 mM +0.3 +0.0 -4.1 -3.3 N.D.
carbon source D-Gluconic Acid (C) +0.3 +0.2 -4.7 -2.7 N.D.
stress R2A with nitrate 200 mM +0.2 -0.2 -4.0 -2.8 N.D.
stress R2A with Lomefloxacin 0.00075 mM -0.5 -0.4 -2.9 -2.8 N.D.
nitrogen source D-Alanine (N) +0.1 +0.1 -4.0 -2.8 N.D.
nitrogen source L-Citrulline (N) -0.5 +0.0 -3.6 -2.5 N.D.
carbon source D-Fructose (C) +0.0 +0.1 -3.5 -3.1 N.D.
nitrogen source L-Serine (N) -0.5 -0.7 -2.7 -2.3 N.D.
stress R2A with Nickel (II) chloride 0.35 mM +0.5 +0.4 -4.5 -2.5 N.D.
carbon source L-Malic (C) -0.1 +0.0 -2.8 -3.2 N.D.
carbon source succinate (C) +0.2 -0.1 -3.4 -2.7 N.D.
carbon source Octanoic (C) +0.0 +0.0 -2.4 -3.5 N.D.
carbon source succinate (C) +0.0 +0.2 -3.5 -2.6 N.D.
carbon source Octanoic (C) +0.0 +0.2 -2.9 -2.9 N.D.
stress R2A with Doxycycline hyclate 0.0001 mg/ml +0.4 +0.2 -2.8 -3.2 N.D.
carbon source D-Lactate (C) +0.4 +0.0 -3.2 -2.4 N.D.
carbon source L-Malic (C) +0.3 +0.1 -3.0 -2.5 N.D.
carbon source a-Ketoglutaric (C) +0.2 +0.2 -3.3 -2.2 N.D.
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RR42_RS15880
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RR42_RS15900
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