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Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS15850 and RR42_RS15855 are separated by 64 nucleotides
RR42_RS15855 and RR42_RS15860 are separated by 75 nucleotides
RR42_RS15860 and RR42_RS15865 are separated by 105 nucleotides
RR42_RS15865 and RR42_RS15870 overlap by 4 nucleotides
RR42_RS15850: RR42_RS15850 - glycerol acyltransferase, at 3,426,564 to 3,427,406
_RS15850
RR42_RS15855: RR42_RS15855 - dihydroorotase, at 3,427,471 to 3,428,745
_RS15855
RR42_RS15860: RR42_RS15860 - aspartate carbamoyltransferase catalytic subunit, at 3,428,821 to 3,429,792
_RS15860
RR42_RS15865: RR42_RS15865 - uracil phosphoribosyltransferase, at 3,429,898 to 3,430,425
_RS15865
RR42_RS15870: RR42_RS15870 - Holliday junction DNA helicase, at 3,430,422 to 3,430,859
_RS15870
Group
Condition
RR42
_RS15850
RR42
_RS15855
RR42
_RS15860
RR42
_RS15865
RR42
_RS15870
carbon source
L-Proline (C)
-0.0
N.D.
N.D.
-2.3
N.D.
stress
R2A with Dimethyl Sulfoxide 5 vol%
-0.3
N.D.
N.D.
-1.6
N.D.
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.7
N.D.
N.D.
-1.2
N.D.
nitrogen source
L-Leucine (N)
-0.1
N.D.
N.D.
-1.8
N.D.
carbon source
Protocatechuic Acid (C)
-0.3
N.D.
N.D.
-1.5
N.D.
carbon source
D-Lactate (C)
-0.1
N.D.
N.D.
-1.7
N.D.
nitrogen source
L-Leucine (N)
-0.1
N.D.
N.D.
-1.3
N.D.
carbon source
Octanoic (C)
-0.2
N.D.
N.D.
-1.1
N.D.
carbon source
Heptanoic (C)
-0.3
N.D.
N.D.
-1.0
N.D.
stress
R2A with Zinc 0.1 mM
-0.3
N.D.
N.D.
-1.0
N.D.
nitrogen source
L-Serine (N)
-0.2
N.D.
N.D.
-1.0
N.D.
carbon source
Protocatechuic Acid (C)
-0.3
N.D.
N.D.
-0.8
N.D.
carbon source
adipate (C)
-0.2
N.D.
N.D.
-0.7
N.D.
nitrogen source
Glucuronamide (N)
-0.4
N.D.
N.D.
-0.6
N.D.
stress
R2A with Chlorite 4 mM
+0.3
N.D.
N.D.
-0.7
N.D.
stress
R2A with Vancomycin 0.5 mg/ml
-0.6
N.D.
N.D.
+0.4
N.D.
stress
R2A with Cisplatin 0.001 mg/ml
+0.4
N.D.
N.D.
-0.6
N.D.
stress
R2A with Thallium(I) acetate 0.001 mg/ml
-0.5
N.D.
N.D.
+0.5
N.D.
carbon source
Heptanoic (C)
-0.3
N.D.
N.D.
+0.7
N.D.
stress
R2A with Sisomicin 0.035 mg/ml
+1.0
N.D.
N.D.
-0.0
N.D.
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
+0.4
N.D.
N.D.
+0.6
N.D.
stress
R2A with Nickel (II) chloride 0.25 mM
+0.2
N.D.
N.D.
+0.8
N.D.
stress
R2A with Nickel (II) chloride 0.35 mM
-0.3
N.D.
N.D.
+1.3
N.D.
stress
R2A with Cobalt chloride 0.3 mM
+0.0
N.D.
N.D.
+1.1
N.D.
stress
R2A with copper (II) chloride 0.25 mM
+0.2
N.D.
N.D.
+1.1
N.D.
stress
R2A with Lomefloxacin 0.00075 mM
+1.6
N.D.
N.D.
+0.2
N.D.
stress
R2A with Lomefloxacin 0.001 mM
+1.4
N.D.
N.D.
+0.5
N.D.
stress
R2A with Cobalt chloride 0.5 mM
+0.2
N.D.
N.D.
+1.9
N.D.
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
+1.9
N.D.
N.D.
+0.6
N.D.
stress
R2A with Nickel (II) chloride 0.5 mM
+1.0
N.D.
N.D.
+2.5
N.D.
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