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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS15500 and RR42_RS15505 are separated by 65 nucleotides
RR42_RS15505 and RR42_RS15510 are separated by 7 nucleotides
RR42_RS15510 and RR42_RS15515 are separated by 41 nucleotides
RR42_RS15515 and RR42_RS15520 are separated by 38 nucleotides
RR42_RS15500: RR42_RS15500 - hypothetical protein, at 3,347,403 to 3,347,846
_RS15500
RR42_RS15505: RR42_RS15505 - hypothetical protein, at 3,347,912 to 3,348,733
_RS15505
RR42_RS15510: RR42_RS15510 - hypothetical protein, at 3,348,741 to 3,349,310
_RS15510
RR42_RS15515: RR42_RS15515 - hypothetical protein, at 3,349,352 to 3,354,169
_RS15515
RR42_RS15520: RR42_RS15520 - hypothetical protein, at 3,354,208 to 3,354,639
_RS15520
Group
Condition
RR42
_RS15500
RR42
_RS15505
RR42
_RS15510
RR42
_RS15515
RR42
_RS15520
carbon source
Octanoic (C)
+0.2
-0.2
-0.9
-0.1
+0.2
stress
R2A with Nickel (II) chloride 0.5 mM
-0.1
+0.2
-0.7
-0.0
+0.0
carbon source
Disodium Glutarate (C)
-0.1
-0.3
-0.4
+0.1
+0.1
carbon source
Suberic (C)
-0.2
+0.2
-0.7
+0.1
+0.1
carbon source
Disodium Glutarate (C)
+0.2
-0.2
-0.4
+0.1
-0.1
carbon source
Protocatechuic Acid (C)
+0.1
-0.5
-0.5
+0.0
+0.4
carbon source
Valeric (C)
-0.1
-0.3
-0.3
+0.1
+0.2
stress
R2A with Chloride 300 mM
-0.2
-0.1
-0.4
+0.2
+0.1
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.1
-0.4
+0.3
-0.1
-0.3
carbon source
Heptanoic (C)
+0.4
-0.5
-0.2
-0.0
+0.1
r2a
R2A
-0.3
-0.2
+0.1
+0.2
-0.1
carbon source
Azelaic (C)
-0.0
-0.5
-0.1
+0.1
+0.3
carbon source
Azelaic (C)
+0.1
-0.2
-0.3
-0.0
+0.4
carbon source
Protocatechuic Acid (C)
-0.1
-0.2
-0.4
+0.2
+0.5
nitrogen source
L-Leucine (N)
-0.3
+0.2
+0.3
-0.1
+0.0
stress
R2A with Cisplatin 0.001 mg/ml
-0.3
+0.5
+0.0
+0.2
-0.2
stress
R2A with Cobalt chloride 0.3 mM
+0.4
+0.1
+0.1
+0.1
-0.4
carbon source
a-Ketoglutaric (C)
+0.0
+0.4
-0.3
+0.1
+0.1
nitrogen source
nitrite (N)
-0.2
+0.2
+0.4
+0.1
+0.0
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.3
+0.2
+0.3
+0.1
-0.3
nitrogen source
casaminos (N)
+0.2
+0.3
+0.1
+0.2
+0.2
stress
R2A with Cobalt chloride 0.5 mM
-0.1
+0.7
+0.2
+0.2
-0.1
temperature
R2A 23C
+0.1
+0.4
+0.1
+0.1
+0.3
temperature
R2A 23C
+0.1
+0.5
-0.0
+0.2
+0.3
stress
R2A with copper (II) chloride 0.25 mM
+0.1
+0.5
+0.1
+0.1
+0.2
nitrogen source
L-Tryptophan (N)
-0.0
+0.3
+0.3
+0.1
+0.3
nitrogen source
nitrate (N)
+0.2
+0.4
+0.4
+0.1
-0.1
stress
R2A with Vancomycin 0.5 mg/ml
+0.1
+0.1
+0.5
+0.2
+0.3
stress
R2A with Nickel (II) chloride 0.35 mM
-0.0
+0.3
+0.6
+0.1
+0.2
stress
R2A with Lomefloxacin 0.00075 mM
+0.1
+0.3
+0.5
+0.1
+0.4
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RR42_RS15510
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RR42_RS15520
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