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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS14920 and RR42_RS14925 are separated by 74 nucleotides
RR42_RS14925 and RR42_RS14930 are separated by 52 nucleotides
RR42_RS14930 and RR42_RS14935 are separated by 15 nucleotides
RR42_RS14935 and RR42_RS14940 are separated by 67 nucleotides
RR42_RS14920: RR42_RS14920 - membrane protein, at 3,226,116 to 3,227,891
_RS14920
RR42_RS14925: RR42_RS14925 - hypothetical protein, at 3,227,966 to 3,228,634
_RS14925
RR42_RS14930: RR42_RS14930 - biopolymer transporter ExbD, at 3,228,687 to 3,229,097
_RS14930
RR42_RS14935: RR42_RS14935 - biopolymer transporter ExbB, at 3,229,113 to 3,230,912
_RS14935
RR42_RS14940: RR42_RS14940 - membrane protein, at 3,230,980 to 3,232,566
_RS14940
Group
Condition
RR42
_RS14920
RR42
_RS14925
RR42
_RS14930
RR42
_RS14935
RR42
_RS14940
stress
R2A with Nickel (II) chloride 0.5 mM
-0.2
-0.3
-1.1
-0.3
+0.1
stress
R2A with D-Cycloserine 0.5 mg/ml
-0.2
-0.3
-0.3
-0.3
-0.3
stress
R2A with Vancomycin 0.5 mg/ml
-0.1
-1.3
+0.4
-0.2
-0.1
stress
R2A with Vancomycin 0.5 mg/ml
-0.0
-0.4
-0.9
+0.3
+0.0
stress
R2A with Thallium(I) acetate 0.001 mg/ml
+0.1
-0.5
-0.4
+0.0
-0.2
stress
R2A with Cobalt chloride 0.5 mM
-0.1
-0.6
-0.2
+0.4
-0.4
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.0
+0.5
-1.5
-0.0
+0.1
carbon source
Carbon source Phenylacetic 2.5 mM
-0.0
+0.2
-1.3
+0.3
+0.1
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.2
+0.5
-1.0
+0.2
-0.2
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
-0.0
+0.1
-1.0
+0.0
+0.3
carbon source
Valeric (C)
+0.0
+0.1
-0.8
+0.2
-0.2
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
-0.3
+0.2
-0.8
-0.0
+0.4
carbon source
Suberic (C)
-0.1
-0.1
-0.6
+0.5
-0.1
r2a
R2A
-0.1
+0.3
-0.5
-0.4
+0.4
carbon source
Carbon source D,L-Lactate 10 mM
+0.2
+0.3
-1.0
-0.0
+0.2
stress
R2A with Cobalt chloride 0.3 mM
+0.2
+0.0
-0.4
+0.5
-0.2
carbon source
Protocatechuic Acid (C)
-0.1
-0.1
-0.5
+0.6
+0.2
carbon source
Pimelic (C)
-0.1
+0.4
-0.4
+0.4
-0.1
carbon source
Valeric (C)
-0.2
+0.4
+0.4
+0.2
-0.4
carbon source
Disodium Glutarate (C)
-0.1
+0.3
+0.1
+0.5
-0.3
carbon source
Octanoic (C)
-0.1
+0.1
-0.2
+0.7
+0.2
carbon source
L-Threonine (C)
-0.0
+0.2
+0.8
+0.1
-0.2
stress
R2A with Cisplatin 0.001 mg/ml
+0.3
-0.2
+0.5
+0.4
-0.1
nitrogen source
L-Citrulline (N)
+0.1
+0.4
+0.5
+0.2
-0.1
nitrogen source
nitrate (N)
+0.1
+0.2
+0.8
-0.1
+0.2
r2a
R2A
+0.1
-0.1
+0.8
+0.2
+0.3
stress
R2A with nitrate 200 mM
+0.1
+0.5
+0.7
+0.0
-0.1
stress
R2A with Bacitracin 0.5 mg/ml
+0.3
-0.1
+0.9
+0.1
+0.1
stress
R2A with copper (II) chloride 0.25 mM
-0.1
-0.1
+1.0
+0.2
+0.4
lb
LB
-0.1
+0.2
+1.1
+0.2
+0.0
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RR42_RS14930
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