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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS14745 and RR42_RS14750 are separated by 195 nucleotides
RR42_RS14750 and RR42_RS14755 are separated by 48 nucleotides
RR42_RS14755 and RR42_RS14760 are separated by 110 nucleotides
RR42_RS14760 and RR42_RS14765 are separated by 19 nucleotides
RR42_RS14745: RR42_RS14745 - diacylglycerol kinase, at 3,178,267 to 3,178,767
_RS14745
RR42_RS14750: RR42_RS14750 - peptidase PMbA, at 3,178,963 to 3,180,333
_RS14750
RR42_RS14755: RR42_RS14755 - hypothetical protein, at 3,180,382 to 3,181,008
_RS14755
RR42_RS14760: RR42_RS14760 - molybdenum cofactor biosynthesis protein MogA, at 3,181,119 to 3,181,709
_RS14760
RR42_RS14765: RR42_RS14765 - transporter, at 3,181,729 to 3,182,610
_RS14765
Group
Condition
RR42
_RS14745
RR42
_RS14750
RR42
_RS14755
RR42
_RS14760
RR42
_RS14765
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
+0.5
+0.0
-4.3
N.D.
nitrogen source
nitrate (N)
N.D.
+0.1
-0.4
-3.1
N.D.
carbon source
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
N.D.
+0.8
-2.2
-1.7
N.D.
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
N.D.
+0.3
-0.1
-3.2
N.D.
stress
R2A with Chlorite 4 mM
N.D.
+0.0
-1.1
-1.7
N.D.
stress
R2A with Vancomycin 0.5 mg/ml
N.D.
+0.2
-2.3
-0.5
N.D.
oxygen_nitrate
exometabolites; 5% oxygen; 5 mM nitrate
N.D.
-0.1
-0.8
-1.1
N.D.
stress
R2A with Chlorite 4 mM
N.D.
-0.1
-1.1
-0.5
N.D.
stress
R2A with Cobalt chloride 0.3 mM
N.D.
-0.2
-0.1
-1.4
N.D.
carbon source
Octanoic (C)
N.D.
-0.2
-0.4
-0.9
N.D.
temperature
R2A 23C
N.D.
-0.1
-1.4
+0.0
N.D.
carbon source
L-Asparagine (C)
N.D.
-0.2
-1.4
+0.1
N.D.
carbon source
adipate (C)
N.D.
-0.2
-1.2
-0.1
N.D.
lb
LB
N.D.
+0.2
-0.1
-1.5
N.D.
carbon source
Suberic (C)
N.D.
-0.1
-0.9
-0.4
N.D.
nitrogen source
L-Tryptophan (N)
N.D.
+0.1
-0.3
-1.0
N.D.
stress
R2A with Cisplatin 0.001 mg/ml
N.D.
+0.6
-1.1
-0.5
N.D.
stress
R2A with A22 0.01 mg/ml
N.D.
-0.3
-0.9
+0.1
N.D.
nitrogen source
L-Valine (N)
N.D.
+0.3
-0.6
-0.4
N.D.
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
N.D.
+0.7
+0.3
-1.6
N.D.
stress
R2A with Thallium(I) acetate 0.001 mg/ml
N.D.
+0.2
-1.0
+0.3
N.D.
stress
R2A with copper (II) chloride 0.25 mM
N.D.
+0.5
-1.0
+0.2
N.D.
stress
R2A with D-Cycloserine 0.5 mg/ml
N.D.
+0.5
-1.5
+0.6
N.D.
carbon source
Disodium Glutarate (C)
N.D.
+0.4
-0.9
+0.1
N.D.
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
N.D.
+0.7
-0.6
-0.3
N.D.
stress
R2A with Polymyxin B sulfate 0.005 mg/ml
N.D.
-0.3
+0.8
-0.6
N.D.
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
N.D.
+0.3
-1.1
+0.9
N.D.
carbon source
Protocatechuic Acid (C)
N.D.
+0.4
-0.3
+0.8
N.D.
stress
R2A with Lomefloxacin 0.00075 mM
N.D.
-0.5
+0.7
+1.0
N.D.
stress
R2A with Sisomicin 0.035 mg/ml
N.D.
+0.3
+1.7
+0.2
N.D.
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