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Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS14370 and RR42_RS14375 are separated by 187 nucleotides
RR42_RS14375 and RR42_RS14380 are separated by 326 nucleotides
RR42_RS14380 and RR42_RS14385 are separated by 328 nucleotides
RR42_RS14385 and RR42_RS14390 are separated by 40 nucleotides
RR42_RS14370: RR42_RS14370 - tRNA pseudouridine synthase A, at 3,088,930 to 3,089,754
_RS14370
RR42_RS14375: RR42_RS14375 - pilus assembly protein FimV, at 3,089,942 to 3,092,824
_RS14375
RR42_RS14380: RR42_RS14380 - aspartate-semialdehyde dehydrogenase, at 3,093,151 to 3,094,287
_RS14380
RR42_RS14385: RR42_RS14385 - 3-isopropylmalate dehydrogenase, at 3,094,616 to 3,095,683
_RS14385
RR42_RS14390: RR42_RS14390 - 3-isopropylmalate dehydratase, at 3,095,724 to 3,096,374
_RS14390
Group
Condition
RR42
_RS14370
RR42
_RS14375
RR42
_RS14380
RR42
_RS14385
RR42
_RS14390
carbon source
L-Phenylalanine (C)
N.D.
+0.0
N.D.
-5.6
-6.3
nitrogen source
L-Tryptophan (N)
N.D.
+0.1
N.D.
-5.6
-6.0
nitrogen source
L-Threonine (N)
N.D.
-0.1
N.D.
-5.1
-6.3
carbon source
a-Ketoglutaric (C)
N.D.
-0.2
N.D.
-5.3
-6.0
carbon source
butyrate (C)
N.D.
-0.1
N.D.
-4.8
-6.4
carbon source
pyruvate (C)
N.D.
-0.1
N.D.
-5.3
-6.0
carbon source
L-Lactate (C)
N.D.
-0.0
N.D.
-5.0
-6.2
nitrogen source
L-Asparagine (N)
N.D.
-0.1
N.D.
-4.8
-6.3
carbon source
L-Alanine (C)
N.D.
+0.1
N.D.
-4.7
-6.4
carbon source
succinate (C)
N.D.
+0.0
N.D.
-4.8
-6.2
carbon source
L-Histidine (C)
N.D.
-0.0
N.D.
-4.9
-6.1
carbon source
Ethanol (C)
N.D.
+0.1
N.D.
-4.7
-6.3
nitrogen source
L-Isoleucine (N)
N.D.
-0.0
N.D.
-4.6
-6.2
carbon source
L-Alanine (C)
N.D.
-0.1
N.D.
-4.4
-6.3
carbon source
L-Malic (C)
N.D.
+0.1
N.D.
-4.6
-6.3
carbon source
pyruvate (C)
N.D.
+0.0
N.D.
-4.8
-6.0
carbon source
Ethanol (C)
N.D.
+0.0
N.D.
-4.8
-6.0
nitrogen source
L-Serine (N)
N.D.
-0.2
N.D.
-5.9
-4.6
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
-0.1
N.D.
-4.5
-6.0
nitrogen source
D-Alanine (N)
N.D.
+0.1
N.D.
-4.4
-6.3
carbon source
D,L-Lactate (C)
N.D.
-0.1
N.D.
-4.4
-6.1
nitrogen source
nitrite (N)
N.D.
+0.1
N.D.
-4.6
-6.0
carbon source
a-Ketoglutaric (C)
N.D.
-0.0
N.D.
-4.2
-6.3
carbon source
L-Glutamine (C)
N.D.
+0.0
N.D.
-4.3
-6.2
carbon source
D-Lactate (C)
N.D.
-0.1
N.D.
-4.4
-6.0
carbon source
L-Tryptophan (C)
N.D.
+0.1
N.D.
-4.4
-6.2
nitrogen source
L-Valine (N)
N.D.
+0.0
N.D.
-4.4
-6.0
carbon source
L-Glutamine (C)
N.D.
-0.2
N.D.
-4.2
-5.9
carbon source
succinate (C)
N.D.
+0.0
N.D.
-4.2
-6.1
carbon source
Suberic (C)
N.D.
-0.2
N.D.
-4.8
-5.2
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