Private Fitness
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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS13845 and RR42_RS13850 are separated by 118 nucleotides
RR42_RS13850 and RR42_RS13855 are separated by 82 nucleotides
RR42_RS13855 and RR42_RS13860 are separated by 82 nucleotides
RR42_RS13860 and RR42_RS13865 are separated by 43 nucleotides
RR42_RS13845: RR42_RS13845 - hypothetical protein, at 2,986,114 to 2,986,398
_RS13845
RR42_RS13850: RR42_RS13850 - hypothetical protein, at 2,986,517 to 2,986,735
_RS13850
RR42_RS13855: RR42_RS13855 - hypothetical protein, at 2,986,818 to 2,987,021
_RS13855
RR42_RS13860: RR42_RS13860 - hypothetical protein, at 2,987,104 to 2,987,286
_RS13860
RR42_RS13865: RR42_RS13865 - hypothetical protein, at 2,987,330 to 2,987,710
_RS13865
Group
Condition
RR42
_RS13845
RR42
_RS13850
RR42
_RS13855
RR42
_RS13860
RR42
_RS13865
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.8
-0.2
-0.2
-0.2
-1.4
carbon source
Octanoic (C)
+0.0
-0.9
+0.2
-0.1
-1.1
carbon source
Disodium Glutarate (C)
+0.1
+0.4
-0.4
-0.1
-1.4
carbon source
a-Ketoglutaric (C)
+0.2
-1.3
-0.3
+0.2
+0.0
carbon source
D,L-Lactate (C)
-0.1
+0.5
+0.2
-0.2
-1.5
carbon source
Azelaic (C)
-0.7
-0.0
+0.2
-0.4
+0.5
carbon source
adipate (C)
-0.3
+1.0
+0.1
-0.4
-0.9
lb
LB
+0.1
-0.3
+0.3
-1.0
+0.4
carbon source
4-Hydroxybenzoic Acid (C)
-0.1
+0.1
+0.1
+0.7
-1.0
stress
R2A with D-Cycloserine 0.5 mg/ml
+0.6
-0.4
-0.5
-0.7
+0.9
carbon source
L-Leucine (C)
-0.3
+0.6
+0.1
+0.2
-0.5
carbon source
Ethanol (C)
-0.0
-0.4
-0.3
-0.1
+1.1
r2a
R2A
+0.2
-0.5
-0.0
-0.3
+0.9
carbon source
Carbon source Phenylacetic 2.5 mM
+0.1
+0.7
-0.1
+0.4
-0.6
carbon source
succinate (C)
+0.1
+1.0
+0.1
-0.0
-0.6
stress
R2A with nitrate 150 mM
-0.3
+0.4
-0.1
+0.2
+0.7
stress
R2A with sodium fluoride 100 mM
+0.2
-0.1
-0.2
-0.3
+1.4
stress
R2A with Lomefloxacin 0.001 mM
+0.1
-1.2
-0.1
+0.6
+1.6
carbon source
L-Malic (C)
+0.3
-0.1
-0.3
+0.3
+0.9
carbon source
Suberic (C)
-0.1
+0.6
+0.2
-0.3
+0.7
carbon source
a-Ketoglutaric (C)
-0.4
+0.8
+0.3
+0.4
+0.1
stress
R2A with Nickel (II) chloride 0.5 mM
+0.6
-0.0
+0.1
-0.1
+1.0
stress
R2A with copper (II) chloride 0.25 mM
+0.2
+0.5
+0.2
-0.2
+1.0
carbon source
propionate (C)
-0.1
+0.7
+0.2
+0.3
+0.6
carbon source
Dodecandioic (C)
-0.0
+0.8
+0.0
+0.3
+0.6
carbon source
D-Lactate (C)
+0.3
+0.4
-0.1
+0.1
+1.0
stress
R2A with Zinc 0.1 mM
+0.4
+0.6
+0.1
+0.4
+0.4
carbon source
D,L-Lactate (C)
+0.1
+1.0
+0.2
+0.3
+0.2
carbon source
L-Lactate (C)
+0.1
+1.0
+0.3
+0.4
+0.2
nitrogen source
L-Glutamine (N)
+0.4
+0.1
+0.2
+0.4
+1.2
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RR42_RS13855
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