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Cofit
Protein
Homologs
Fitness for 5 genes in
Cupriavidus basilensis FW507-4G11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RR42_RS13805 and RR42_RS13810 are separated by 90 nucleotides
RR42_RS13810 and RR42_RS13815 are separated by 118 nucleotides
RR42_RS13815 and RR42_RS13820 are separated by 131 nucleotides
RR42_RS13820 and RR42_RS13825 are separated by 160 nucleotides
RR42_RS13805: RR42_RS13805 - NTP pyrophosphohydrolase, at 2,978,408 to 2,979,274
_RS13805
RR42_RS13810: RR42_RS13810 - glycerol kinase, at 2,979,365 to 2,980,927
_RS13810
RR42_RS13815: RR42_RS13815 - FAD-dependent oxidoreductase, at 2,981,046 to 2,982,650
_RS13815
RR42_RS13820: RR42_RS13820 - membrane protein, at 2,982,782 to 2,982,988
_RS13820
RR42_RS13825: RR42_RS13825 - hypothetical protein, at 2,983,149 to 2,983,535
_RS13825
Group
Condition
RR42
_RS13805
RR42
_RS13810
RR42
_RS13815
RR42
_RS13820
RR42
_RS13825
carbon source
Suberic (C)
+0.1
-0.4
N.D.
N.D.
-0.7
carbon source
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
-0.1
-0.6
N.D.
N.D.
+0.2
temperature
R2A 23C
-0.4
-0.3
N.D.
N.D.
+0.2
lb
LB
+0.5
-0.6
N.D.
N.D.
+0.0
r2a
R2A
-0.4
-0.5
N.D.
N.D.
+0.8
stress
R2A with Zinc 0.1 mM
-0.3
-0.1
N.D.
N.D.
+0.6
stress
R2A with Chloride 300 mM
+0.1
-0.3
N.D.
N.D.
+0.5
stress
R2A with nitrate 200 mM
-0.3
-0.2
N.D.
N.D.
+0.9
carbon source
Protocatechuic Acid (C)
+0.1
-0.3
N.D.
N.D.
+0.7
stress
R2A with Vancomycin 0.5 mg/ml
+0.5
+0.6
N.D.
N.D.
-0.5
stress
R2A with Chloride 300 mM
+0.3
-0.1
N.D.
N.D.
+0.5
carbon source
L-Alanine (C)
+0.3
-0.0
N.D.
N.D.
+0.6
nitrogen source
nitrate (N)
+0.3
+0.3
N.D.
N.D.
+0.3
carbon source
propionate (C)
+0.4
+0.2
N.D.
N.D.
+0.2
carbon source
L-Lactate (C)
+0.2
+0.0
N.D.
N.D.
+0.6
carbon source
succinate (C)
+0.3
+0.3
N.D.
N.D.
+0.3
carbon source
adipate (C)
+0.5
-0.2
N.D.
N.D.
+0.8
carbon source
D,L-Lactate (C)
+0.3
+0.3
N.D.
N.D.
+0.5
stress
R2A with Thallium(I) acetate 0.001 mg/ml
+0.4
+0.2
N.D.
N.D.
+0.5
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.5
+0.5
N.D.
N.D.
+0.1
stress
R2A with Cobalt chloride 0.3 mM
+0.5
+0.8
N.D.
N.D.
-0.1
stress
R2A with Doxycycline hyclate 0.0001 mg/ml
+0.5
+0.5
N.D.
N.D.
+0.3
nitrogen source
L-Serine (N)
+0.5
+0.4
N.D.
N.D.
+0.5
nitrogen source
L-Serine (N)
+0.5
+0.4
N.D.
N.D.
+0.6
stress
R2A with Nickel (II) chloride 0.5 mM
+0.4
+1.0
N.D.
N.D.
+0.1
carbon source
Carbon source 2-Deoxy-D-Ribose 20 mM
+0.4
+0.4
N.D.
N.D.
+0.7
stress
R2A with Nickel (II) chloride 0.35 mM
+0.4
+0.7
N.D.
N.D.
+0.5
carbon source
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
+0.4
+0.9
N.D.
N.D.
+0.4
stress
R2A with Nickel (II) chloride 0.35 mM
+0.3
+0.3
N.D.
N.D.
+1.3
stress
R2A with Cobalt chloride 0.5 mM
+0.9
+1.0
N.D.
N.D.
+0.0
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