Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 143 experiments or choose conditions or try the comparative fitness browser

500 ntRR42_RS13545 and RR42_RS13550 are separated by 52 nucleotidesRR42_RS13550 and RR42_RS13555 are separated by 2 nucleotidesRR42_RS13555 and RR42_RS13560 are separated by 193 nucleotidesRR42_RS13560 and RR42_RS13565 are separated by 282 nucleotides RR42_RS13545: RR42_RS13545 - enoyl-CoA hydratase, at 2,923,816 to 2,924,667 _RS13545 RR42_RS13550: RR42_RS13550 - 3-hydroxyacyl-CoA dehydrogenase, at 2,924,720 to 2,925,520 _RS13550 RR42_RS13555: RR42_RS13555 - anthraniloyl-CoA monooxygenase (EC 1.14.13.40) (from data), at 2,925,523 to 2,927,913 _RS13555 RR42_RS13560: RR42_RS13560 - propionyl-CoA synthetase, at 2,928,107 to 2,929,999 _RS13560 RR42_RS13565: RR42_RS13565 - lytic transglycosylase, at 2,930,282 to 2,931,973 _RS13565
Group Condition RR42_RS13545 RR42_RS13550 RR42_RS13555 RR42_RS13560 RR42_RS13565
carbon source L-Tryptophan (C) N.D. -3.7 -3.3 +0.1 +0.0
carbon source L-Tryptophan (C) N.D. -3.0 -3.3 +0.0 +0.1
nitrogen source L-Tryptophan (N) N.D. -2.2 -2.0 +0.1 +0.1
nitrogen source L-Tryptophan (N) N.D. -2.1 -2.1 +0.1 +0.2
stress R2A with Chloride 300 mM N.D. -0.2 +0.0 +0.1 -2.1
stress R2A with Vancomycin 0.5 mg/ml N.D. -0.2 +0.2 -0.1 -1.7
stress R2A with Chloride 300 mM N.D. -0.2 -0.2 +0.2 -1.5
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM N.D. -0.1 -0.3 -0.0 -1.4
stress R2A with Nickel (II) chloride 0.5 mM N.D. -0.5 -0.1 -0.1 -0.6
stress R2A with nitrate 150 mM N.D. -0.1 -0.1 -0.1 -1.0
stress R2A with Vancomycin 0.5 mg/ml N.D. +0.1 -0.1 +0.1 -1.4
stress R2A with copper (II) chloride 0.25 mM N.D. -0.0 +0.1 +0.0 -1.4
stress R2A with nitrate 200 mM N.D. +0.0 +0.2 +0.1 -1.5
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM N.D. +0.2 -0.1 -0.0 -1.3
lb LB N.D. -0.5 -0.7 -0.0 +0.3
nitrogen source L-Glutamine (N) N.D. -1.0 -0.1 +0.1 +0.1
stress R2A with Nickel (II) chloride 0.35 mM N.D. -0.1 +0.1 +0.1 -0.9
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM N.D. +0.4 -0.3 +0.1 -0.6
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM N.D. +0.3 +0.2 -0.1 -0.7
carbon source L-Histidine (C) N.D. -0.5 -0.0 +0.0 +0.4
stress R2A with Cisplatin 0.001 mg/ml N.D. -0.4 +0.4 +0.2 -0.0
stress R2A with D-Cycloserine 0.5 mg/ml N.D. -0.3 -0.1 +0.1 +0.5
carbon source Disodium Glutarate (C) N.D. +0.2 -0.4 +0.1 +0.4
carbon source propionate (C) N.D. -0.2 +0.3 +0.1 +0.3
carbon source Octanoic (C) N.D. -0.0 -0.2 -0.1 +0.9
carbon source Octanoic (C) N.D. -0.1 +0.1 -0.1 +0.7
stress R2A with Doxycycline hyclate 0.0001 mg/ml N.D. -0.3 -0.0 +0.0 +1.1
nitrogen source Glycine (N) N.D. -0.1 +0.1 +0.0 +0.8
temperature R2A 23C N.D. +0.1 +0.4 +0.2 +0.2
carbon source Carbon source Phenylacetic 2.5 mM N.D. +0.5 +0.2 +0.1 +0.3
remove
RR42_RS13545
plot		 remove
RR42_RS13550
plot		 remove
RR42_RS13555		 remove
RR42_RS13560
plot		 remove
RR42_RS13565
plot