Fitness for 5 genes in Cupriavidus basilensis FW507-4G11

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500 ntRR42_RS13540 and RR42_RS13545 are separated by 15 nucleotidesRR42_RS13545 and RR42_RS13550 are separated by 52 nucleotidesRR42_RS13550 and RR42_RS13555 are separated by 2 nucleotidesRR42_RS13555 and RR42_RS13560 are separated by 193 nucleotides RR42_RS13540: RR42_RS13540 - acyl-CoA dehydrogenase, at 2,922,637 to 2,923,800 _RS13540 RR42_RS13545: RR42_RS13545 - enoyl-CoA hydratase, at 2,923,816 to 2,924,667 _RS13545 RR42_RS13550: RR42_RS13550 - 3-hydroxyacyl-CoA dehydrogenase, at 2,924,720 to 2,925,520 _RS13550 RR42_RS13555: RR42_RS13555 - anthraniloyl-CoA monooxygenase (EC 1.14.13.40) (from data), at 2,925,523 to 2,927,913 _RS13555 RR42_RS13560: RR42_RS13560 - propionyl-CoA synthetase, at 2,928,107 to 2,929,999 _RS13560
Group Condition RR42_RS13540 RR42_RS13545 RR42_RS13550 RR42_RS13555 RR42_RS13560
carbon source L-Tryptophan (C) -2.0 N.D. -3.7 -3.3 +0.1
carbon source L-Tryptophan (C) -2.1 N.D. -3.0 -3.3 +0.0
nitrogen source L-Tryptophan (N) -2.2 N.D. -2.2 -2.0 +0.1
nitrogen source L-Tryptophan (N) -1.4 N.D. -2.1 -2.1 +0.1
nitrogen source L-Glutamine (N) -0.7 N.D. -1.0 -0.1 +0.1
lb LB +0.0 N.D. -0.5 -0.7 -0.0
r2a R2A -0.7 N.D. -0.2 -0.1 -0.1
nitrogen source nitrite (N) -0.6 N.D. -0.3 +0.1 -0.1
carbon source D-Lactate (C) -0.5 N.D. -0.3 -0.1 -0.1
stress R2A with Cisplatin 0.001 mg/ml -0.7 N.D. -0.2 +0.1 -0.1
carbon source D,L-Lactate (C) -0.1 N.D. -0.5 -0.2 +0.0
carbon source 4-Hydroxybenzoic Acid (C) -0.5 N.D. -0.1 -0.3 -0.0
stress R2A with Nickel (II) chloride 0.5 mM +0.1 N.D. -0.5 -0.1 -0.1
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate -0.5 N.D. +0.1 -0.2 -0.0
stress R2A with Paraquat dichloride 0.064 mg/ml -0.4 N.D. -0.3 +0.4 -0.1
oxygen_nitrate exometabolites; 10% oxygen; 5 mM nitrate -0.4 N.D. +0.3 -0.3 -0.0
carbon source Carbon source Deoxyribonucleic from herring sperm 10 mg/mL -0.8 N.D. +0.3 +0.2 -0.1
r2a R2A -0.7 N.D. +0.1 +0.2 +0.1
carbon source propionate (C) -0.3 N.D. -0.2 +0.3 +0.1
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM -0.4 N.D. +0.3 +0.2 -0.1
carbon source Disodium Glutarate (C) +0.5 N.D. +0.2 -0.4 +0.1
stress R2A with Cisplatin 0.001 mg/ml +0.4 N.D. -0.4 +0.4 +0.2
carbon source Carbon source Phenylacetic 2.5 mM -0.3 N.D. +0.5 +0.2 +0.1
stress R2A with Chloride 300 mM +0.7 N.D. -0.2 -0.2 +0.2
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM +0.4 N.D. +0.4 -0.3 +0.1
stress R2A with Cobalt chloride 0.5 mM +0.6 N.D. -0.1 -0.2 +0.3
carbon source adipate (C) +0.9 N.D. -0.0 -0.1 -0.1
carbon source propionate (C) +0.7 N.D. -0.1 +0.1 -0.0
temperature R2A 23C +0.3 N.D. +0.1 +0.4 +0.2
carbon source Heptanoic (C) +0.6 N.D. +0.2 +0.0 +0.1
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